Find hotels in Clayton, NY from ฿2,093

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

This weekend
Next weekend

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Clayton hotels

Chateau Country Inn

Chateau Country Inn
2.0 star property
Clayton
9.6 out of 10, Exceptional, (146 reviews)
"Clean room and great area"
United States
Astrid
The price is ฿4,130
฿4,585 total
includes taxes & fees
11 May - 12 May
Chateau Country Inn

West Winds Motel & Cottages

West Winds Motel & Cottages
2.5 star property
Clayton
9.2 out of 10, Wonderful, (164 reviews)
"Easy check in Beautiful location right on the River. "
Canada
Nancy
The price is ฿3,178
฿3,527 total
includes taxes & fees
11 May - 12 May
West Winds Motel & Cottages

The Clipper Inn

The Clipper Inn
3.0 star property
Clayton
8.4 out of 10, Very good, (278 reviews)
"Great place to stay. "
United States
Shannyn
The price is ฿2,917
฿3,238 total
includes taxes & fees
5 May - 6 May
The Clipper Inn

1000 Islands Harbor Hotel

1000 Islands Harbor Hotel
3.5 star property
Clayton
9.2 out of 10, Wonderful, (1,000 reviews)
"It was a good stay …"
United States
CARLOS
The price is ฿4,430
฿4,918 total
includes taxes & fees
11 May - 12 May
1000 Islands Harbor Hotel

3 Mi to St Lawrence River: Spacious Ranch Home

3 Mi to St Lawrence River: Spacious Ranch Home
3.0 star property
Clayton
3 Mi to St Lawrence River: Spacious Ranch Home

Capt. Thomson's Resort

Capt. Thomson's Resort
3.0 star property
Alexandria Bay Downtown
9.4 out of 10, Exceptional, (1,000 reviews)
"Awesome hotel and location!"
United States
John
The price is ฿3,016
฿3,347 total
includes taxes & fees
2 May - 3 May
Capt. Thomson's Resort

Allen's Budget Motel

Allen's Budget Motel
2.5 star property
Watertown
8.8 out of 10, Excellent, (249 reviews)
"Stay was very comfortable and the staff was excellent "
United States
Randall
The price is ฿1,886
฿2,093 total
includes taxes & fees
7 May - 8 May
Allen's Budget Motel

Riveredge Resort

Riveredge Resort
3.5 star property
Alexandria Bay Downtown
8.4 out of 10, Very good, (1,000 reviews)
"The room was clean and the staff great."
United States
April
The price is ฿3,540
฿3,930 total
includes taxes & fees
1 May - 2 May
Riveredge Resort

Ramada by Wyndham Watertown/Thousand Islands NY

Ramada by Wyndham Watertown/Thousand Islands NY
2.5 star property
Watertown
8.0 out of 10, Very good, (1,022 reviews)
"Perfect location for being I. The midst of shoppers in Watertown "
Canada
Debra
The price is ฿1,967
฿2,183 total
includes taxes & fees
11 May - 12 May
Ramada by Wyndham Watertown/Thousand Islands NY

Capt.'s Inn & Suites

Capt.'s Inn & Suites
2.0 star property
Alexandria Bay
8.8 out of 10, Excellent, (1,000 reviews)
"Great place"
United States
Lori
The price is ฿2,360
฿2,620 total
includes taxes & fees
19 May - 20 May
Capt.'s Inn & Suites

Days Inn by Wyndham Watertown Fort Drum

Days Inn by Wyndham Watertown Fort Drum
2.0 star property
Calcium
8.8 out of 10, Excellent, (1,000 reviews)
"Clean rooms and incredibly friendly staff! "
Canada
Brianna
The price is ฿2,295
฿2,547 total
includes taxes & fees
3 May - 4 May
Days Inn by Wyndham Watertown Fort Drum

Rock Ledge Motel

Rock Ledge Motel
2.5 star property
Alexandria Bay
9.2 out of 10, Wonderful, (265 reviews)
"Nice place, we would stay there again. Quiet, clean, friendly. "
United States
Helinka
The price is ฿2,478
฿2,751 total
includes taxes & fees
17 May - 18 May
Rock Ledge Motel

Nest Inn

Nest Inn
2.0 star property
Watertown
7.8 out of 10, Good, (71 reviews)
" Hans was very nice. Lots of parking & close to downtown."
Canada
Kimberly
The price is ฿1,829
฿2,212 total
includes taxes & fees
4 May - 5 May
Nest Inn

The GillHouse

The GillHouse
2.0 star property
Henderson Harbor
9.2 out of 10, Wonderful, (5 reviews)
"Clean room "
United States
Byron
The price is ฿3,691
฿4,097 total
includes taxes & fees
9 May - 10 May
The GillHouse

Hampton Inn Watertown

Hampton Inn Watertown
2.5 star property
Watertown
9.0 out of 10, Wonderful, (1,000 reviews)
"Staff was very polite, the room was beautiful and the pool was awesome!! "
United States
Jessica
The price is ฿3,929
฿4,361 total
includes taxes & fees
31 May - 1 Jun
Hampton Inn Watertown

The Roxy Cape Vincent

The Roxy Cape Vincent
2.5 star property
Cape Vincent
9.0 out of 10, Wonderful, (44 reviews)
"Great location for our trip. "
United States
Andrew
The price is ฿5,047
฿5,603 total
includes taxes & fees
15 May - 16 May
The Roxy Cape Vincent

Quality Inn & Suites Watertown Fort Drum

Quality Inn & Suites Watertown Fort Drum
2.5 star property
Calcium
8.2 out of 10, Very good, (1,001 reviews)
"Great staff. Leaving fort drum and this hotel helped us tremendously. So grateful"
United States
Ashley
The price is ฿2,530
฿2,809 total
includes taxes & fees
10 May - 11 May
Quality Inn & Suites Watertown Fort Drum

Comfort Inn & Suites Watertown - 1000 Islands

Comfort Inn & Suites Watertown - 1000 Islands
2.5 star property
Watertown
8.4 out of 10, Very good, (1,025 reviews)
"Perfect stay. Very clean hotel and good breakfast."
Canada
Jacques
The price is ฿3,307
฿3,671 total
includes taxes & fees
10 May - 11 May
Comfort Inn & Suites Watertown - 1000 Islands

Bonnie Castle Resort & Marina

Bonnie Castle Resort & Marina
3.0 star property
Alexandria Bay Downtown
7.0 out of 10, Good, (1,000 reviews)
"Good place"
Canada
Dr. Adeel
The price is ฿3,475
฿3,988 total
includes taxes & fees
3 May - 4 May
Bonnie Castle Resort & Marina

Travel Inn

Travel Inn
2.0 star property
Watertown
6.0 out of 10, (15 reviews)
"Bed was comfortable. "
Canada
Karen
The price is ฿2,262
฿2,511 total
includes taxes & fees
3 May - 4 May
Travel Inn
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Stay near popular Clayton attractions

Learn more about Clayton

Nestled along the St. Lawrence River, this charming village invites you to explore its historic city centre and scenic waterfront. Cruise the Thousand Islands, visit Boldt Castle on Heart Island, or cast a line for bass in one of Clayton's many fishing spots.

Clayton, NY, USA - 02-09-2025:  Winter aerial image Clayton, NY along a frozen St Lawrence River

Top Clayton Hotel Reviews

More cheap stays in Clayton

Frequently asked questions

Where is the best place to stay in Clayton?
1000 Islands Harbor Hotel is one of the top choices for your stay based on our traveller data. This hotel offers a restaurant and an indoor pool. Other good choices for your visit include Chateau Country Inn and The Clipper Inn. See all available top hotels, or vacation rentals in Clayton.
If I need to cancel my hotel reservation in Clayton, will I receive a refund?
Yes, the majority of room reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which often is within 24-48 hours of check in. If you have a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of booking. Filter your search by fully refundable to find flexible hotel deals in Clayton.
What's the best dog-friendly place to stay in Clayton?
The Clipper Inn is a top dog-friendly inn, and offers a restaurant along with free WiFi for its human guests. West Winds Motel & Cottages is another option for a stay with your pet. See more pet-friendly hotel accommodations in Clayton.
What's the best accommodation for a golf trip to Clayton?
The Clipper Inn is a top inn that has an adjacent golf course and features free WiFi. Another good choice is Wooden Boat Inn if you'd like to be close to a golf course while in town. You can tee off at C-Way Golf Course during your trip. See more golf hotels in Clayton.
What are some accommodation options with pools in Clayton?
1000 Islands Harbor Hotel: Features free self parking, an indoor pool and complimentary wireless Internet access. Another option that features an on-site pool is West Winds Motel & Cottages. View all hotels with pools in Clayton.
What's it like staying in Clayton?
Visitors to Clayton will definitely enjoy the riverfront. Tourists can also enjoy so much more including its coffee shops. In Clayton, there are 120 hotels and other accommodation options to choose from. Find out more about Clayton.
What is there to see in Clayton?
Cultural venues include The Clayton Opera House, Thousand Islands Museum and Antique Boat Museum. Natural beauty is on display at Lake Ontario, Grenell Island and Blind Bay. A couple of additional sights to add to your itinerary are 1000 Islands River Rat Cheese and Clayton Marina. Take a look at what more there is to see and do in Expedia's Clayton guide.
What's the seasonal weather like in Clayton?
The hottest months are usually July and August, with an average temperature of 19°C, while the coldest months are January and February, with an average of -3°C. The snowiest months in Clayton are January, February, March and November, with each month seeing an average of 47 cm of snowfall.

Explore a world of travel with Expedia