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Check prices for these dates

Tonight
16 Oct - 17 Oct
Tomorrow
17 Oct - 18 Oct
This weekend
16 Oct - 18 Oct
Next weekend
23 Oct - 25 Oct

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Our top choices for Boot Key Harbor hotels

A marina with several docked boats and a row of small, white cabins with blue roofs.
A compact bedroom with two beds, a small bathroom, and a view of the outdoors.
A waterfront property with floating houses connected by a wooden dock.
A modern kitchen with white cabinets, a microwave, and a dining area with a table and chairs.

1. Yacht Haven Marina

Yacht Haven Marina
2.2 km from Boot Key Harbor
United States
Lauren
฿3,602
฿8,783 total
includes taxes & fees
19 Oct - 20 Oct
Yacht Haven Marina
An aerial view of a resort with a central pool, multiple buildings, and a beach area with sun loungers.
A beach with white chairs and kayaks, palm trees, and a clear view of the ocean.
A beach scene with two white chairs, a hammock, and palm trees.
An aerial view of a resort with a large building, a beach, and a pier in the background.

2. Isla Bella Beach Resort & Spa

Isla Bella Beach Resort & Spa
2.4 km from Boot Key Harbor
United States
Clinton
฿6,932
฿9,811 total
includes taxes & fees
18 Oct - 19 Oct
Isla Bella Beach Resort & Spa
A resort with a pool, lounge chairs, and a view of the ocean.
A dock with boats, a wooden pier, and a distant shoreline with palm trees.
A modern kitchen with dark countertops, stainless steel appliances, and wooden cabinets.
A deck with tables and chairs, overlooking a calm body of water and palm trees.

3. Bluegreen Vacations Hammocks at Marathon, Ascend Collection Resort

Bluegreen Vacations Hammocks at Marathon, Ascend Collection Resort
1.2 km from Boot Key Harbor
United States
Arianna
฿5,669
฿7,320 total
includes taxes & fees
15 Nov - 16 Nov
Bluegreen Vacations Hammocks at Marathon, Ascend Collection Resort
Two hammocks on a sandy beach with a clear blue sky and turquoise water.
An aerial view of a coastal resort with a marina, palm trees, and a large building complex.
A bar area with a view of the ocean, bar stools, umbrellas, and a variety of bottles.
A poolside area with lounge chairs, blue umbrellas, and a fire pit.

4. Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys

Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys
0.8 km from Boot Key Harbor
United States
amy
฿4,799
฿6,572 total
includes taxes & fees
26 Oct - 27 Oct
Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys
A coastal landscape with clear turquoise waters and a dense tree line under a bright blue sky with scattered clouds.
A coastal area with a marina, boats, and a small island with buildings.
A beach with a wooden pier, palm trees, and a clear blue sky.
A waterfront dock with boats and a sunset.

5. Captain Pips Marina & Hideaway

Captain Pips Marina & Hideaway
1.2 km from Boot Key Harbor
United States
michael
฿3,288
฿5,584 total
includes taxes & fees
26 Oct - 27 Oct
Captain Pips Marina & Hideaway
Exterior
Garden
Sun deck
A modern kitchen with white cabinets and a built-in microwave.

6. Aqua Lodges at 47th Street Gulfside

Aqua Lodges at 47th Street Gulfside
1.9 km from Boot Key Harbor
United States
Lauren
฿3,589
฿8,751 total
includes taxes & fees
28 Oct - 29 Oct
Aqua Lodges at 47th Street Gulfside
An outdoor seating area with wicker furniture and cushions, a thatched-roof structure, and lush greenery.
A food truck parked in a lush garden with a brick pathway, surrounded by various plants and a white fence.
A bedroom with a bed, bedside tables, a TV, and a sliding glass door to the outside.
A thatched-roof bar area with a large island counter, bar stools, and a television screen.

7. Tropical Cottages

Tropical Cottages
2.9 km from Boot Key Harbor
United States
Aaron
฿2,657
฿2,989 total
includes taxes & fees
18 Oct - 19 Oct
Tropical Cottages
Pool
Exterior
View from room
Lobby

8. Faro Blanco Resort Marathon Florida Keys, Curio by Hilton

Faro Blanco Resort Marathon Florida Keys, Curio by Hilton
1 km from Boot Key Harbor
United States
Rick
฿5,469
฿7,414 total
includes taxes & fees
16 Nov - 17 Nov
Faro Blanco Resort Marathon Florida Keys, Curio by Hilton
A nighttime pool area with a clear view of the pool, surrounding palm trees, and a building with a sign.
A table with breakfast items, a basket, and a view of a parking lot and buildings.
A buffet setup with various food items and condiments.
A waterfront property with a swimming pool, palm trees, and a white fence.

9. Skipjack Resort & Marina

Skipjack Resort & Marina
1.7 km from Boot Key Harbor
Canada
Justin
฿5,116
฿7,118 total
includes taxes & fees
18 Oct - 19 Oct
Skipjack Resort & Marina
Three Adirondack chairs on a sandy beach with a view of the ocean and a clear sky.
A clear view of a swimming pool with lounge chairs and umbrellas, surrounded by palm trees and a clear sky.
An aerial view of a marina with multiple boats docked, surrounded by a sandy beach and palm trees.
A beach with lounge chairs, palm trees, and a string of lights.

10. Banana Bay Resort & Marina

Banana Bay Resort & Marina
1.6 km from Boot Key Harbor
United States
Alex
฿4,242
฿6,091 total
includes taxes & fees
3 Nov - 4 Nov
Banana Bay Resort & Marina
A swimming pool surrounded by palm trees and lounge chairs.
An aerial view of a resort with a central swimming pool, surrounded by lush greenery and palm trees, with a view of the ocean.
A beach scene with a wooden deck, palm trees, and a gazebo-like structure.
A spacious living room with a wooden coffee table, a striped sofa, and a television on a wooden cabinet.

11. Tranquility Bay Beachfront Hotel and Resort

Tranquility Bay Beachfront Hotel and Resort
0.7 km from Boot Key Harbor
United Kingdom
Stuart
฿6,408
฿9,355 total
includes taxes & fees
15 Nov - 16 Nov
Tranquility Bay Beachfront Hotel and Resort
A beach with palm trees, a sandy path, and beach chairs.
Three Adirondack chairs on a sandy beach with a view of the ocean and a clear sky.
A floating houseboat with a covered deck and seating area, docked at a marina.
A spacious living area with a gray sectional sofa, wooden beams, and a ceiling fan.

12. Aqua Lodge Rentals At Coconut Cay

Aqua Lodge Rentals At Coconut Cay
3.9 km from Boot Key Harbor
United States
Susan
฿2,806
฿8,202 total
includes taxes & fees
18 Oct - 19 Oct
Aqua Lodge Rentals At Coconut Cay
A hammock on a sandy beach with palm trees, a pool, and lounge chairs in the background.
A view from a balcony overlooking a beach with palm trees, a wooden deck, and a blue picnic table.
A wooden pier leading to a dock with boats, a clear sky, and calm water.
A pool with a view of the ocean and beach chairs.

13. Seascape Resort & Marina

Seascape Resort & Marina
4.1 km from Boot Key Harbor
United States
PAOLA
฿3,955
฿6,146 total
includes taxes & fees
19 Oct - 20 Oct
Seascape Resort & Marina
A bar area with a long counter, bar stools, and a view of the water.
A balcony with a view of a body of water, a pool, and outdoor seating.
A Marriott Fairfield Inn & Suites with a modern design, featuring a covered entrance and palm trees.
A balcony with a view of the ocean, a round table, and two chairs.

14. Fairfield Inn & Suites by Marriott Marathon Florida Keys

Fairfield Inn & Suites by Marriott Marathon Florida Keys
8.3 km from Boot Key Harbor
United States
Andrew
฿4,494
฿5,056 total
includes taxes & fees
25 Oct - 26 Oct
Fairfield Inn & Suites by Marriott Marathon Florida Keys
A wooden deck with a pool and chairs overlooking a beach with palm trees.
A hotel room with a sofa, a desk, a chair, a TV, and a balcony with curtains.
A bar area with stools, a counter, and hanging lanterns.
A pool area with palm trees and a view of the ocean.

15. Grassy Flats Resort & Beach Club

Grassy Flats Resort & Beach Club
15.6 km from Boot Key Harbor
United States
Tiffany
฿6,162
฿8,541 total
includes taxes & fees
15 Nov - 16 Nov
Grassy Flats Resort & Beach Club
A wooden dock leading to a row of boats, with a thatched-roof building and palm trees in the background.
A bedroom with a bed, two bedside lamps, a glass table, and a view of a balcony with palm trees.
A covered outdoor seating area with tables and chairs, overlooking a body of water and a distant shoreline.
Two bicycles parked on a sandy beach with the ocean in the background.

16. Bonefish Bay Motel

Bonefish Bay Motel
8.1 km from Boot Key Harbor
United States
Billy
฿3,163
฿3,558 total
includes taxes & fees
29 Oct - 30 Oct
Bonefish Bay Motel
Three colorful drinks on a table with a thatched roof and outdoor seating.
A bar area with wicker chairs and a thatched roof, overlooking a body of water with boats.
A modern living room with a large sectional sofa, a flat-screen TV, and a view of the sea through large windows.
A pool area with lounge chairs, a thatched-roof structure, and a view of the ocean.

17. Hampton Inn Marathon - Florida Keys

Hampton Inn Marathon - Florida Keys
8.5 km from Boot Key Harbor
United States
Linda
฿4,385
฿4,933 total
includes taxes & fees
26 Oct - 27 Oct
Hampton Inn Marathon - Florida Keys
A pool area with lounge chairs and umbrellas, a thatched-roof structure, and a view of the ocean.
A beach with a palm tree, clear blue water, and a bridge in the distance.
A modern kitchen with a central island, a dining area with a view of the beach, and a living room with a large window overlooking the ocean.
A spacious living area with a view of the ocean, a balcony with a pool, and a staircase leading to another level.

18. Glunz Ocean Beach Hotel & Resort

Glunz Ocean Beach Hotel & Resort
8.3 km from Boot Key Harbor
United States
Judy
฿5,664
฿7,813 total
includes taxes & fees
18 Oct - 19 Oct
Glunz Ocean Beach Hotel & Resort
A marina with a dock, a boat, and a row of buildings with large windows.
A bedroom with a bed, a dresser, a large window, and a painting of a sunset over the ocean.
A wooden deck with a covered area, green Adirondack chairs, and a view of palm trees and a water body.
A two-story beachfront hotel with a wooden deck, palm trees, and a clear sky.

19. Coconut Cay Resort & Marina

Coconut Cay Resort & Marina
3.7 km from Boot Key Harbor
United States
Oscar
฿2,461
฿3,139 total
includes taxes & fees
28 Oct - 29 Oct
Coconut Cay Resort & Marina
A covered outdoor area with a view of a pool and palm trees.
A hotel room with two beds, white bedding, and a blue accent.
A covered patio with a round table and chairs, large windows, and a view of a street and greenery.
A reception desk with a marble countertop, a Toshiba laptop, a vase with white flowers, and a sign indicating an office.

20. Kingsail Resort

Kingsail Resort
3.6 km from Boot Key Harbor
United States
Caroline
฿2,592
฿2,916 total
includes taxes & fees
27 Oct - 28 Oct
Kingsail Resort
View all properties

Compare popular hotels close to Boot Key Harbor

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
A marina with several docked boats and a row of small, white cabins with blue roofs.
Yacht Haven Marina
9.6
Exceptional
371 reviews
View
An aerial view of a resort with a central pool, multiple buildings, and a beach area with sun loungers.
Isla Bella Beach Resort & Spa
9.2
Wonderful
1,291 reviews
View
A resort with a pool, lounge chairs, and a view of the ocean.
Bluegreen Vacations Hammocks at Marathon, Ascend Collection Resort
9.2
Wonderful
147 reviews
View
Two hammocks on a sandy beach with a clear blue sky and turquoise water.
Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys
9.0
Wonderful
1,001 reviews
View
A coastal landscape with clear turquoise waters and a dense tree line under a bright blue sky with scattered clouds.
Captain Pips Marina & Hideaway
9.0
Wonderful
1,000 reviews
View

Top Boot Key Harbor Hotel Reviews

Banana Bay Resort & Marina

Banana Bay Resort & Marina

8/10 Good
"The rooms are modern and clean. The hotel area is rustic as it should be in the keys. My only complaint is the fees. Parking fees and hotel/service fees... Oh, and the beautiful bar with the perfect water view is only open for two hours (during sunset)."
Amil 1-night trip
Posted 9 hours ago
Banana Bay Resort & Marina
Yacht Haven Marina

Yacht Haven Marina

10/10 Excellent
"A quiet, amazing little gem! Clean, no bugs, Close to Publix- everything you need !"
Samantha 3-night trip
Posted 12 hours ago
Yacht Haven Marina
Tranquility Bay Beachfront Hotel and Resort

Tranquility Bay Beachfront Hotel and Resort

10/10 Excellent
"N/a"
Aidelyn 2-night trip
Posted 1 day ago
Tranquility Bay Beachfront Hotel and Resort
Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys

Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys

8/10 Good
"Staff was very pleasant. But the stay was not cheap. And I have two "issues". First - We had a breakfast plan with the room and we were given 2 $25 vouchers (1 each) for the two days we stayed. When I viewed the initial bill, we were billed $50 for breakfast on the first day, even though we used the vouchers. The hotel staff removed that charge when I brought it up to them, but it shouldn't have been there in the first place. Second issue - We arrived around 2 pm on Sunday and left around Noon on Tuesday. Parking was $20 per day. When I viewed the final bill, we were charged for 3 days of parking, even though we spent less than 48 hours at the hotel. Yes, the car was in the lot one full day and part of 2 other days, but I have NEVER been charged for 3 days parking at ANY HOTEL EVER when I spent just two nights in the hotel. Generally, parking follows the room charge - 2 days room = 2 days parking. I think that is really poor given that this is an expensive resort managed by a major hotel chain."
Philip 2-night trip
Posted 2 days ago
Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys
Captain Pips Marina & Hideaway

Captain Pips Marina & Hideaway

10/10 Excellent
"Really good place the room we had was the flounder and it was super fantastic"
Todd c 2-night trip
Posted 2 days ago
Captain Pips Marina & Hideaway
Faro Blanco Resort Marathon Florida Keys, Curio by Hilton

Faro Blanco Resort Marathon Florida Keys, Curio by Hilton

10/10 Excellent
"As soon as we"
Stephen 4-night trip
Posted 2 days ago
Faro Blanco Resort Marathon Florida Keys, Curio by Hilton
Marlin Bay Resort & Marina

Marlin Bay Resort & Marina

10/10 Excellent
"Everything was perfection during our week there. "
Allison 7-night trip
Posted 7 months ago
Marlin Bay Resort & Marina

Other attractions near Boot Key Harbor

A sea turtle swimming underwater.
Photo by Cider Hoff

The Turtle Hospital

9.2/10 (946 reviews)
Explore the campus of The Turtle Hospital as part of your travels around Marathon. Stroll along the area's seaside or simply savour its seafood restaurants.
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A golf course with a curved path, palm trees, and a clear blue sky.

Florida Keys Country Club

8.2/10 (111 reviews)
Play a round of golf in Marathon at Florida Keys Country Club, and enjoy other activities such as running. Stroll along the area's marina or simply savour its seafood restaurants.
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A beach with clear turquoise water, white sand, and palm trees.

Sombrero Beach

9.0/10 (2,464 reviews)
Play beach games; go swimming, kayaking or snorkeling; and lounge in the sun at one of Marathon’s most visited beaches.
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A sign for Crane Point Hammock with a tree logo and potted plants.

Crane Point Museum and Nature Center

8.6/10 (54 reviews)
You can spend an afternoon exploring the galleries in Crane Point Museum and Nature Center in Marathon. Discover the area's beautiful sunsets or seek out its jogging trails.
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A tall red lighthouse on a pier in the ocean.

Vaca Key

8.8/10 (411 reviews)
Commune with nature and explore the great outdoors at Vaca Key during your travels in Marathon. Stroll along the seaside or discover the area's beautiful sunsets.
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A bridge over turquoise water with a clear sky.

Seven Mile Bridge

9.4/10 (3,266 reviews)
Walk, jog, cycle or drive across one of the longest bridges in North America to take in the scenic ocean views it provides.
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Shady Palm Art Gallery

You can spend time browsing the exhibits at Shady Palm Art Gallery during your trip to Marathon. Stroll along the area's seaside or simply savour its seafood restaurants.
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Marathon Air Museum

You can spend an afternoon browsing the exhibits at Marathon Air Museum during your travels in Marathon.
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Frequently asked questions

What's the area like around Boot Key Harbor?
Boot Key Harbor is located in Marathon. Travellers love the area for its beautiful beaches, top seafood restaurants and dolphin watching opportunities. If you're looking for a convenient place to stay, take a look at the 216 hotels and other accommodation options you'll find within a mile.
Where is the best place to stay near Boot Key Harbor?
Faro Blanco Resort Marathon Florida Keys, Curio by Hilton is one of the top choices for your stay based on our traveller data, and this resort offers a marina and 4 outdoor pools. It's located just a short 0.6 mi (1 km) from Boot Key Harbor. Other good options within a short distance include Tranquility Bay Beachfront Hotel and Resort and Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys.
How many hotels will I find close to Boot Key Harbor?
Expedia has 216 hotels and other accommodation options within a mile from Boot Key Harbor.
If I need to cancel the hotel reservation for my stay near Boot Key Harbor, will I receive a refund?
Yes! Most hotel reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you have a reservation that's non-refundable, it might still be possible to cancel it and be given a refund within a 24-hour period of your booking. Add dates, click "Search", then filter by "fully refundable" to review top deals close to Boot Key Harbor.
What can I see and do near Boot Key Harbor?
Lounge by the water at Sombrero Beach and Sunset Park Beach. Attractions like Shady Palm Art Gallery and Crane Point Museum and Nature Center highlight the local culture. Explore nature at Vaca Key and Pigeon Key.