Search Hotels Near Shelter Island, San Diego

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Check prices for these dates

Tonight
6 Jan - 7 Jan
Tomorrow
7 Jan - 8 Jan
This weekend
9 Jan - 11 Jan
Next weekend
16 Jan - 18 Jan

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Our top choices for Shelter Island hotels

Exterior
Bay Club Hotel & Marina

Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
0.7 km from Shelter Island
9.2 out of 10, Wonderful, (3264)
"Really nice and excellent service at the hotel !!! "
United States
ISIDRO
The price is ฿3,636
฿4,179 total
includes taxes & fees
8 Jan - 9 Jan
Bay Club Hotel & Marina
Exterior
Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
0.4 km from Shelter Island
8.8 out of 10, Excellent, (1576)
"Great room, location, staff, and amenities."
United States
Randy
The price is ฿3,933
฿4,521 total
includes taxes & fees
20 Jan - 21 Jan
Best Western Plus Island Palms Hotel & Marina
Property grounds
Humphreys Half Moon Inn

Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1 km from Shelter Island
9.2 out of 10, Wonderful, (2749)
"Great stay, highly recommend."
United States
Ryan
The price is ฿4,666
฿5,990 total
includes taxes & fees
8 Jan - 9 Jan
Humphreys Half Moon Inn
Theatre show
Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
2.4 km from Shelter Island
9.4 out of 10, Exceptional, (1375)
"The rooms were great and staff was very friendly but above all their breakfast was amazing."
Canada
Peter
The price is ฿5,549
฿6,378 total
includes taxes & fees
11 Jan - 12 Jan
Homewood Suites by Hilton San Diego Airport/Liberty Station
Lobby
Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
2.7 km from Shelter Island
9.2 out of 10, Wonderful, (1721)
"Breakfast was delicious and the airport shuttle was great!"
United States
Jaime
The price is ฿4,596
฿5,283 total
includes taxes & fees
13 Jan - 14 Jan
Hampton Inn & Suites San Diego Airport Liberty Station
Front of property
The Pearl Hotel

The Pearl Hotel

The Pearl Hotel
4.0 star property
1.6 km from Shelter Island
8.8 out of 10, Excellent, (1003)
"Lovely spot would stay again "
United States
danixa
The price is ฿3,593
฿4,059 total
includes taxes & fees
12 Jan - 13 Jan
The Pearl Hotel
Standard Room, 2 Queen Beds, Non Smoking, Microwave | Desk, blackout curtains, iron/ironing board, cots/infant beds
Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Shelter Island
8.6 out of 10, Excellent, (1667)
"Spotless room, nice staff, great breakfast"
United States
DAVID
The price is ฿2,635
฿3,024 total
includes taxes & fees
7 Jan - 8 Jan
Best Western Yacht Harbor Hotel
Gift shop
Sea Harbor Hotel

Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
1.4 km from Shelter Island
8.6 out of 10, Excellent, (1014)
"Room was spotless, great location."
United States
Dennis
Sea Harbor Hotel
Lobby
TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
2.8 km from Shelter Island
9.0 out of 10, Wonderful, (1006)
"Clean, quiet, centrally located, great staff"
United States
Wendy
The price is ฿4,763
฿5,475 total
includes taxes & fees
16 Jan - 17 Jan
TownePlace Suites by Marriott San Diego Airport/Liberty Station
View from room
The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton
3.5 star property
1.6 km from Shelter Island
8.6 out of 10, Excellent, (642)
"Staff was friendly and very clean and comfortable room."
United States
Bryant
The price is ฿3,983
฿4,579 total
includes taxes & fees
19 Jan - 20 Jan
The Monsaraz San Diego, Tapestry Collection by Hilton
Terrace/patio
Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
2.5 km from Shelter Island
8.8 out of 10, Excellent, (1229)
"Clean and spacious rooms, wonderful bar on the bay, great place to see Christmas boat parade, friendly staff."
United States
Jessica or Ian
The price is ฿5,110
฿5,874 total
includes taxes & fees
18 Jan - 19 Jan
Hilton San Diego Airport/Harbor Island
Water view
Kona Kai San Diego

Kona Kai San Diego

Kona Kai San Diego
4.0 star property
0.2 km from Shelter Island
8.2 out of 10, Very good, (1003)
"had a wonderful time for our honey moon here "
United States
Anna
The price is ฿4,675
฿7,252 total
includes taxes & fees
10 Jan - 11 Jan
Kona Kai San Diego
Bar (on property)
DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside
3.0 star property
1.8 km from Shelter Island
8.2 out of 10, Very good, (1000)
"The room was quiet and clean, airport shuttle was nice, the reason we chose this motel."
United States
Douglas
The price is ฿4,083
฿4,693 total
includes taxes & fees
18 Jan - 19 Jan
DoubleTree by Hilton San Diego Bayside
Exterior
Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
1.6 km from Shelter Island
7.8 out of 10, Good, (1233)
"Cute place... prime location... very clean and updated rooms... comfortable beds. "
United States
Kristin
The price is ฿2,755
฿3,112 total
includes taxes & fees
25 Jan - 26 Jan
Comfort Inn San Diego Airport At The Harbor
Lobby
Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport
3.0 star property
1.6 km from Shelter Island
7.4 out of 10, Good, (1007)
"Very pleasent reception staff. "
United States
Anil S V
The price is ฿2,843
฿3,262 total
includes taxes & fees
19 Jan - 20 Jan
Ramada by Wyndham San Diego Airport
Standard Room | Blackout curtains, iron/ironing board, free WiFi, bed sheets
Hotel Point Loma

Hotel Point Loma

Hotel Point Loma
2.0 star property
1.5 km from Shelter Island
7.4 out of 10, Good, (356)
"Great staff and very friendly "
United States
Nalani
Hotel Point Loma
Exterior detail
Hotel Aqua Mar

Hotel Aqua Mar

Hotel Aqua Mar
2.0 star property
1.7 km from Shelter Island
6.4 out of 10, (1000)
"A/C / Heat works great!"
United States
Candice
Hotel Aqua Mar
Suite, 1 Bedroom | In-room safe, individually decorated, individually furnished, desk
Sunrise Inn San Diego

Sunrise Inn San Diego

Sunrise Inn San Diego
2.0 star property
1.2 km from Shelter Island
5.6 out of 10, (1003)
"For the price and location this hotel is great. My go to when I’m down in San Diego and don’t want to break the bank "
United States
carmina
Sunrise Inn San Diego
Lobby sitting area
Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel
2.0 star property
Ocean Beach, 4.3 km from Shelter Island
9.6 out of 10, Exceptional, (389)
"Very well kept. Breakfast time is awesome and the rate for the stay was very well worth it."
United States
Jose
Samesun Ocean Beach - Hostel
Property grounds
The Inn at Sunset Cliffs

The Inn at Sunset Cliffs

The Inn at Sunset Cliffs
2.5 star property
Ocean Beach, 3.6 km from Shelter Island
9.2 out of 10, Wonderful, (1001)
"Amazing location, staff, and parking"
United States
Barbara
The price is ฿6,889
฿7,768 total
includes taxes & fees
7 Jan - 8 Jan
The Inn at Sunset Cliffs
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top Shelter Island Hotel Reviews

The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton

10/10 Excellent
"Staff courteous, very beautiful entry, room was perfect. "
Lydia 2-night trip
Posted 2 weeks ago
The Monsaraz San Diego, Tapestry Collection by Hilton
Kona Kai San Diego

Kona Kai San Diego

10/10 Excellent
"Room nicely appointed. Great view of boats. Service and food at conference was very good. I had a very enjoyable stay"
Barbara 2-night trip
Posted 2 months ago
Kona Kai San Diego

Hotels near other Shelter Island attractions

Sunset Cliffs Natural Park, San Diego, California

Sunset Cliffs Natural Park

You can take time to visit Sunset Cliffs Natural Park during your travels to San Diego. Wander the seaside and beautiful beaches in the area.
See properties
Favorite sunset
Photo by Bikini Traveler
Open Photo by Bikini Traveler

Breakers Beach

Why not spend a lazy afternoon at Breakers Beach during your trip to San Diego? Experience the acclaimed art galleries and fascinating museums in this walkable area.
See properties

Frequently asked questions

What's the area like around Shelter Island?
Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, take a look at the 47 hotels and other accommodation options you'll find within a mile.
What's the best place to stay near Shelter Island?
Adjacent to Shelter Island, Best Western Plus Island Palms Hotel & Marina is one of the top choices for your stay based on our traveller data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Bay Club Hotel & Marina and Kona Kai San Diego.
How many hotels will I be able to find near Shelter Island?
Expedia has 47 hotels and other accommodation options within a mile from Shelter Island.
If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?
Yes! Most hotel room reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of your booking. Add dates, click "Search", then you can use the "fully refundable" filter to get the best deals near Shelter Island.
What can I see and do near Shelter Island?
You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego or San Diego Air and Space Museum. Explore notable local landmarks like Hotel del Coronado, Point Loma Lighthouse and Star of India. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park and San Diego Civic Theatre.