A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

Find hotels in San Juan Island, WA from ฿3,678

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Check prices for these dates

This weekend
10 Jul - 12 Jul
Next weekend
17 Jul - 19 Jul

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Star rating

Our top choices for San Juan Island hotels

Breakfast included
Property grounds

The Orca Inn

The Orca Inn
2.0 star property
Friday Harbor
8.6 out of 10, Excellent, (34 reviews)
"Great no-frills room a short walk from Friday Harbor with friendly and helpful staff. The beds could use a headboard though! A nice budget option on an island that tends to have expensive lodging."
United States
Jane
The price is ฿4,506
฿4,985 total
includes taxes & fees
13 Jul - 14 Jul
The Orca Inn
Exterior detail

Discovery Inn

Discovery Inn
2.0 star property
Friday Harbor
10.0 out of 10, Exceptional, (19 reviews)
"Excellent front desk, very helpful."
United States
Thomas
The price is ฿9,282
฿10,271 total
includes taxes & fees
3 Aug - 4 Aug
Discovery Inn
Exterior

Trumpeter Inn

Trumpeter Inn
3.0 star property
Friday Harbor
10.0 out of 10, Exceptional, (262 reviews)
"This was our first experience at a bed & breakfast, and it was a great one! We would book again."
United States
Rene
The price is ฿10,865
฿11,989 total
includes taxes & fees
26 Jul - 27 Jul
Trumpeter Inn
Flat-screen TV, fireplace

Snug Harbor Resort

Snug Harbor Resort
2.5 star property
Friday Harbor
9.8 out of 10, Exceptional, (525 reviews)
"Serene and cozy resort."
United States
Toshimasa
The price is ฿18,325
฿20,221 total
includes taxes & fees
9 Aug - 10 Aug
Snug Harbor Resort
Lobby sitting area

Earthbox Inn & Spa

Earthbox Inn & Spa
3.0 star property
Friday Harbor
8.8 out of 10, Excellent, (1,008 reviews)
"Very nice and cozy place to stay."
United States
Nicole
The price is ฿9,847
฿10,896 total
includes taxes & fees
9 Aug - 10 Aug
Earthbox Inn & Spa
Deluxe Room, 1 King Bed | Premium bedding, free WiFi, bed sheets

Saturn's Return

Saturn's Return
2.0 star property
Friday Harbor
9.6 out of 10, Exceptional, (27 reviews)
"Great place to stay in San Juan island. Very quiet and tranquil, and the breakfast was amazing. "
United States
Stanyslav
The price is ฿16,830
฿18,572 total
includes taxes & fees
2 Aug - 3 Aug
Saturn's Return
Café

Friday Harbor Suites

Friday Harbor Suites
2.5 star property
Friday Harbor
8.6 out of 10, Excellent, (1,011 reviews)
"Great location close to attractions"
United States
Ken
The price is ฿9,680
฿10,711 total
includes taxes & fees
9 Aug - 10 Aug
Friday Harbor Suites
Exterior

Friday Harbor House

Friday Harbor House
3.5 star property
Friday Harbor
9.6 out of 10, Exceptional, (275 reviews)
"Really great hotel Friendly helpful staff Good food"
United States
Paul
The price is ฿21,996
฿24,339 total
includes taxes & fees
9 Aug - 10 Aug
Friday Harbor House
Beach

Bird Rock Hotel

Bird Rock Hotel
2.0 star property
Friday Harbor
8.8 out of 10, Excellent, (377 reviews)
"Great location, nice and roomy space! Downsides were the adjacent grocery store loading dock was noisy late at night and early in the morning and there is no designated parking."
United States
Larry
The price is ฿8,345
฿9,233 total
includes taxes & fees
9 Aug - 10 Aug
Bird Rock Hotel
Exterior

Friday Harbor Grand B&B

Friday Harbor Grand B&B
3.0 star property
Friday Harbor
9.6 out of 10, Exceptional, (141 reviews)
"This place is class on every level…from the room cleanliness, to fresh baked cookies in the evening, to the delicious breakfast, to the informative host. But what sets it above all others is the evening’s piano event which should not be missed. We had a 3 night stay and we hope to return."
United States
Karen
Friday Harbor Grand B&B
Front of property

Tucker House Inn

Tucker House Inn
4.0 star property
Friday Harbor
9.2 out of 10, Wonderful, (291 reviews)
"Beautiful property, wonderful staff, excellent amenities and service. Proximity to downtown and SJI brewery and ferry was big bonus. Many thx for a wonderful stay."
United States
Kao Bin
The price is ฿14,473
฿16,014 total
includes taxes & fees
9 Aug - 10 Aug
Tucker House Inn
Lobby

Coachman Inn & Suites

Coachman Inn & Suites
2.5 star property
Oak Harbor
9.2 out of 10, Wonderful, (1,011 reviews)
"It was a great stay"
United States
Harry
The price is ฿5,669
฿6,309 total
includes taxes & fees
16 Jul - 17 Jul
Coachman Inn & Suites
Exterior

The Marina Inn

The Marina Inn
2.5 star property
Anacortes
9.6 out of 10, Exceptional, (1,012 reviews)
"The staff and accommodation is fantastic."
Canada
Farjam
The price is ฿6,308
฿7,063 total
includes taxes & fees
13 Jul - 14 Jul
The Marina Inn
Exterior

Anacortes Ship Harbor Inn

Anacortes Ship Harbor Inn
3.0 star property
Anacortes
9.0 out of 10, Wonderful, (1,036 reviews)
"This place was great. Comfortable beds, great breakfast, convenient to the ferry, and a great view with quiet surroundings. Best of all the price was very reasonable."
United States
Carol
The price is ฿5,377
฿5,963 total
includes taxes & fees
29 Jul - 30 Jul
Anacortes Ship Harbor Inn
Exterior

Best Western Plus Oak Harbor Hotel & Conference Center

Best Western Plus Oak Harbor Hotel & Conference Center
2.5 star property
Oak Harbor
9.0 out of 10, Wonderful, (1,003 reviews)
"Friendly staff. Comfy bed. Could use more blanket and sink was slow to drain. Overall a good stay."
United States
Barbara
The price is ฿6,382
฿7,103 total
includes taxes & fees
2 Aug - 3 Aug
Best Western Plus Oak Harbor Hotel & Conference Center
Family Suite, 2 Bedrooms, Non Smoking | Individually decorated, individually furnished, desk, blackout curtains

Acorn Motor Inn

Acorn Motor Inn
2.5 star property
Oak Harbor
8.0 out of 10, Very good, (689 reviews)
"Great location! Janet at the front desk was very friendly and extremely funny!"
United States
Eileen
The price is ฿3,304
฿3,678 total
includes taxes & fees
12 Jul - 13 Jul
Acorn Motor Inn
Property grounds

Anacortes Inn

Anacortes Inn
2.0 star property
Anacortes
8.8 out of 10, Excellent, (538 reviews)
"Great place to stay for whale watching and traveling."
United States
Kathleen
The price is ฿5,307
฿5,952 total
includes taxes & fees
15 Jul - 16 Jul
Anacortes Inn
Standard Room, 2 Queen Beds | Free WiFi

San Juan Motel

San Juan Motel
2.0 star property
Anacortes
8.0 out of 10, Very good, (631 reviews)
"It was clean and the location was close to everything we needed"
United States
Karen
The price is ฿2,503
฿2,776 total
includes taxes & fees
13 Jul - 14 Jul
San Juan Motel
Exterior

Anaco Bay Inn

Anaco Bay Inn
2.0 star property
Anacortes
7.8 out of 10, Good, (1,005 reviews)
"Quaint older Lodge style. Our room was large with small kitchenette. Minimal shampoo and soap. Plenty horizontal surface area for toiletries and luggage. Glad to have a sofa, but it had some age on it. Breakfast minimal."
United States
Cherie
The price is ฿3,304
฿3,665 total
includes taxes & fees
22 Jul - 23 Jul
Anaco Bay Inn
Room, 1 Bedroom, Fireplace, Marina View (Deer Harbor Inn #2) | Beach

Deer Harbor Inn

Deer Harbor Inn
3.0 star property
Deer Harbor
8.4 out of 10, Very good, (210 reviews)
"Very quiet and uncrowded. Matthew's BBQ/SMOKE HOUSE restaurant and the music were great 👍"
United States
Theodore
The price is ฿9,573
฿10,564 total
includes taxes & fees
12 Jul - 13 Jul
Deer Harbor Inn
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Stay near popular San Juan Island attractions

A marina with boats docked, surrounded by forested hills and a town with buildings.

Roche Harbor Marina

9.4/10 (332 reviews)
Explore the waterfront in Roche Harbor with a trip to Roche Harbor Marina. While you're in the area, stroll along the seaside.
See properties

Learn more about San Juan Island

San Juan Island entices visitors with its quaint harbor towns, forest trails and the chance to see a range of wildlife, including endangered orcas.

See all hotels in San Juan Island
A marina with numerous boats docked, a wooden pier, and a forested hill in the background.

Top San Juan Island Hotel Reviews

Rosario Resort

Rosario Resort

10/10 Excellent
"The reviews we read had us worried, but our experience was wonderful. We had a beautiful room right at the water’s edge and enjoyed swimming in the pool. Although the washing machines could use some updating, we were able to wash everything we needed on-site. The staff was kind, but be aware that if you arrive after hours, you will need to find your room on your own. We had no trouble because the maps were clear and the directions made sense. However, other reviewers are correct when they warn you to have your key-entry information saved or printed before arriving. There is no cell service at the property, so you will have to backtrack several miles to access your room information. I would not really describe the property as a resort anymore. Different parts of the property appear to be under separate ownership. The mansion does not seem to be part of Rosario, there are no tennis courts, and the restaurant is also separately owned. Overall, we had a wonderful time at Rosario and would gladly stay there again. Four otters splashed in the water below our room in the early mornings, and seaplanes flew in about once a day. It was quiet at night, peaceful, and incredibly relaxing."
Kirstin 5-night trip
Posted 9 hours ago
Rosario Resort

More cheap stays in San Juan Island

Auld Holland Inn

Auld Holland Inn

33575 State Route 20 Oak Harbor WA
The price is ฿4,194 per night from 22 Jul to 23 Jul
฿4,194
฿4,668 total
22 Jul - 23 Jul
includes taxes & fees
8.2/10 Very good! (1,009 reviews)