Search Hotels in Lincoln, San Rafael

Start date: Check-in selected.
To Date
End date: Check-out
  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Next weekend
In two weeks

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Lincoln hotels

Marin Lodge

Marin Lodge
2.0 star property
Lincoln
9.6 out of 10, Exceptional, (1000)
"The room was very clean and the front staff were helpful and courteous. Will definitely stay here again!"
United States
Carla
The price is ฿3,383
฿3,789 total
includes taxes & fees
29 Dec - 30 Dec
Marin Lodge

Villa Inn

Villa Inn
2.0 star property
Lincoln
8.0 out of 10, Very good, (1001)
"Yes Everyone was fantastic "
United States
Don
The price is ฿3,408
฿3,817 total
includes taxes & fees
29 Dec - 30 Dec
Villa Inn

Club Quarters Hotel in San Francisco

Club Quarters Hotel in San Francisco
4.0 star property
23.5 km from Lincoln
8.8 out of 10, Excellent, (2833)
"Clean room, friendly staff and good location"
United States
Jose Eduardo
The price is ฿3,112
฿3,663 total
includes taxes & fees
30 Dec - 31 Dec
Club Quarters Hotel in San Francisco

Hilton San Francisco Financial District

Hilton San Francisco Financial District
4.0 star property
23.4 km from Lincoln
8.8 out of 10, Excellent, (2196)
"Great hotel "
United States
Tanya
The price is ฿3,410
฿4,014 total
includes taxes & fees
4 Jan - 5 Jan 2026
Hilton San Francisco Financial District

Hotel Caza Fisherman's Wharf

Hotel Caza Fisherman's Wharf
4.0 star property
21.7 km from Lincoln
9.0 out of 10, Wonderful, (3834)
"Excellent stay and great location! "
United States
CHRISTINE
The price is ฿3,931
฿6,051 total
includes taxes & fees
4 Jan - 5 Jan 2026
Hotel Caza Fisherman's Wharf

DoubleTree by Hilton Hotel Berkeley Marina

DoubleTree by Hilton Hotel Berkeley Marina
4.0 star property
22.5 km from Lincoln
8.2 out of 10, Very good, (4032)
"It was a great stay "
United States
Yagnesh
The price is ฿3,687
฿4,247 total
includes taxes & fees
18 Jan - 19 Jan 2026
DoubleTree by Hilton Hotel Berkeley Marina

Sonesta Emeryville - San Francisco Bay Bridge

Sonesta Emeryville - San Francisco Bay Bridge
3.0 star property
26.2 km from Lincoln
8.6 out of 10, Excellent, (1303)
"Convenient location, friendly staff"
United States
Diane
The price is ฿3,445
฿4,213 total
includes taxes & fees
4 Jan - 5 Jan 2026
Sonesta Emeryville - San Francisco Bay Bridge

Hotel Shattuck Plaza

Hotel Shattuck Plaza
4.0 star property
25.9 km from Lincoln
8.8 out of 10, Excellent, (1094)
"Wonderful, will stay here again."
United States
Jennifer
Hotel Shattuck Plaza

Hilton Garden Inn San Francisco/Oakland Bay Bridge

Hilton Garden Inn San Francisco/Oakland Bay Bridge
3.0 star property
25.6 km from Lincoln
8.8 out of 10, Excellent, (1164)
"Great staff and services provided."
United States
Charles
The price is ฿3,502
฿3,929 total
includes taxes & fees
2 Jan - 3 Jan 2026
Hilton Garden Inn San Francisco/Oakland Bay Bridge

Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
4.0 star property
21.8 km from Lincoln
8.6 out of 10, Excellent, (2338)
"Great location"
United States
Deborah
The price is ฿3,898
฿5,684 total
includes taxes & fees
26 Jan - 27 Jan 2026
Hotel Zephyr San Francisco

HYATT house Emeryville/San Francisco Bay Area

HYATT house Emeryville/San Francisco Bay Area
3.0 star property
25.9 km from Lincoln
9.2 out of 10, Wonderful, (1190)
"Excellent staff, room, atmosphere."
United States
Mary
The price is ฿4,469
฿5,014 total
includes taxes & fees
4 Jan - 5 Jan 2026
HYATT house Emeryville/San Francisco Bay Area

InterContinental San Francisco by IHG

InterContinental San Francisco by IHG
4.0 star property
24.7 km from Lincoln
9.2 out of 10, Wonderful, (1041)
"Pleasant stay"
United States
Yiwei
The price is ฿5,369
฿7,598 total
includes taxes & fees
3 Jan - 4 Jan 2026
InterContinental San Francisco by IHG

Holiday Inn Golden Gateway by IHG

Holiday Inn Golden Gateway by IHG
3.5 star property
23.2 km from Lincoln
9.0 out of 10, Wonderful, (5044)
"Rooms were great, staff was great, location was great. "
United States
Jonathan
The price is ฿3,476
฿4,091 total
includes taxes & fees
5 Jan - 6 Jan 2026
Holiday Inn Golden Gateway by IHG

Hotel Riu Plaza Fisherman's Wharf

Hotel Riu Plaza Fisherman's Wharf
4.0 star property
21.8 km from Lincoln
9.0 out of 10, Wonderful, (7242)
"Great place to stay!"
United States
Isaiah
The price is ฿3,093
฿4,919 total
includes taxes & fees
5 Jan - 6 Jan 2026
Hotel Riu Plaza Fisherman's Wharf

Hotel Zoe Fisherman's Wharf

Hotel Zoe Fisherman's Wharf
4.0 star property
21.8 km from Lincoln
9.2 out of 10, Wonderful, (1639)
"Great location, service, and rooms!"
United States
Joyce
The price is ฿3,603
฿5,560 total
includes taxes & fees
5 Jan - 6 Jan 2026
Hotel Zoe Fisherman's Wharf

Claremont Resort & Club

Claremont Resort & Club
5.0 star property
28.5 km from Lincoln
8.8 out of 10, Excellent, (1003)
"Great hotel"
United States
Peter
The price is ฿6,794
฿9,663 total
includes taxes & fees
8 Jan - 9 Jan 2026
Claremont Resort & Club

Hyatt Centric Fisherman's Wharf San Francisco

Hyatt Centric Fisherman's Wharf San Francisco
4.0 star property
21.8 km from Lincoln
8.6 out of 10, Excellent, (1480)
"Wonderful Stay"
United States
Robert
The price is ฿4,190
฿6,209 total
includes taxes & fees
4 Jan - 5 Jan 2026
Hyatt Centric Fisherman's Wharf San Francisco

Hotel Nikko San Francisco

Hotel Nikko San Francisco
4.5 star property
24.1 km from Lincoln
9.4 out of 10, Exceptional, (2662)
"Great service, great location, great hotel. "
United States
Laura
The price is ฿4,722
฿6,984 total
includes taxes & fees
4 Jan - 5 Jan 2026
Hotel Nikko San Francisco

Marriott Vacation Club®, San Francisco

Marriott Vacation Club®, San Francisco
3.0 star property
21.8 km from Lincoln
9.2 out of 10, Wonderful, (1117)
"Great hotel"
United States
Michelle
The price is ฿4,190
฿4,931 total
includes taxes & fees
23 Jan - 24 Jan 2026
Marriott Vacation Club®, San Francisco

Hyatt Place San Francisco Downtown

Hyatt Place San Francisco Downtown
3.0 star property
25.5 km from Lincoln
9.2 out of 10, Wonderful, (1896)
"Great hotel!"
United States
Michael
The price is ฿4,624
฿5,442 total
includes taxes & fees
29 Dec - 30 Dec
Hyatt Place San Francisco Downtown
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Lincoln

Find the best Lincoln areas for the activities you enjoy most.

Downtown San Rafael

While visiting Downtown San Rafael, you might make a stop by sights like Mission San Rafael Arcangel and San Rafael Pacifics Albert Park.

Terra Linda

Terra Linda might not have many top sights, but Marin County Civic Center and Marin County Civic Center Farmers' Market are two attractions nearby that you can check out.

Southeast San Rafael

While there might not be top attractions in Southeast San Rafael, you can explore the larger area and discover places like Marin Country Mart and Larkspur Ferry Terminal.

Lucas Valley-Marinwood

If you're looking for some top things to see and do in Lucas Valley-Marinwood and surrounding area, you can visit Marin County Civic Center and Marin County Civic Center Farmers' Market.

Gerstle Park

While Gerstle Park isn't home to many top sights, Mission San Rafael Arcangel and San Rafael Pacifics Albert Park are some notable places to visit nearby.

Top Lincoln Hotel Reviews

Frequently asked questions

What is Lincoln like?
Travellers to San Rafael's Lincoln neighbourhood will be sure to enjoy a stay here.
What's the best accommodation in Lincoln?
Based on Expedia customer reviews, Marin Lodge is the highest ranked property in Lincoln. This hotel offers free parking and free WiFi.
How many hotels will I be able to find in the Lincoln area?
Expedia has 5 Lincoln hotels and other accommodation options, and one might make a good home base for venturing out into the greater San Rafael area.
If I need to cancel my hotel reservation in Lincoln, will I receive a refund?
Yes! Most hotel reservations are fully refundable as long as you cancel prior to the accommodation's cancellation deadline, which often is within 24-48 hours of the scheduled arrival. If your reservation is non-refundable, you might be able to still cancel and get a refund within a 24-hour period of your booking. Add dates, click "Search", then use the "fully refundable" filter to get top deals in Lincoln.
What is there to do in this San Rafael neighbourhood?
A few places to visit in the area around Lincoln include Marin History Museum, Falkirk Cultural Center and Mission San Rafael Arcangel. While you're out sightseeing in San Rafael, make sure that you visit other sights such as Classic Billiards or Rebound Bookstore.