Search Hotels in Southeast San Rafael, San Rafael

Start date: Check-in selected.
To Date
End date: Check-out
  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Southeast San Rafael hotels

Extended Stay America Suites San Rafael Francisco Blvd East

Extended Stay America Suites San Rafael Francisco Blvd East
2.5 star property
Southeast San Rafael
6.8 out of 10, (1001)
"The room was clean! And the service was great!"
United States
Ana Lorena
The price is ฿3,479
฿3,904 total
includes taxes & fees
20 Dec - 21 Dec
Extended Stay America Suites San Rafael Francisco Blvd East

Hotel Riu Plaza Fisherman's Wharf

Hotel Riu Plaza Fisherman's Wharf
4.0 star property
17.8 km from Southeast San Rafael
9.0 out of 10, Wonderful, (7201)
"Good location and great hotel to stay, the bed was very comfortable and the breakfast was good with lots of options! "
Canada
Veronica
The price is ฿3,378
฿5,271 total
includes taxes & fees
21 Dec - 22 Dec
Hotel Riu Plaza Fisherman's Wharf

Hilton San Francisco Financial District

Hilton San Francisco Financial District
4.0 star property
19.3 km from Southeast San Rafael
8.8 out of 10, Excellent, (2148)
"Great hotel "
United States
Tanya
The price is ฿3,368
฿3,965 total
includes taxes & fees
22 Dec - 23 Dec
Hilton San Francisco Financial District

The Mosser

The Mosser
3.0 star property
20.4 km from Southeast San Rafael
8.0 out of 10, Very good, (1001)
"Easy check-in, nice swanky little lobby and friendly staff. The room was small though not an issue as it had everything we needed and was clean. Neat old building right next to moscone center west and near lots of restaurants. Great location for the price."
United States
Jon
The price is ฿2,200
฿2,585 total
includes taxes & fees
3 Jan - 4 Jan 2026
The Mosser

Holiday Inn Express Hotel & Suites Berkeley by IHG

Holiday Inn Express Hotel & Suites Berkeley by IHG
2.5 star property
20.3 km from Southeast San Rafael
9.0 out of 10, Wonderful, (1000)
"The room are very clean and the staff is very courteous and friendly. "
United States
Maria Carmen
The price is ฿4,338
฿4,997 total
includes taxes & fees
22 Dec - 23 Dec
Holiday Inn Express Hotel & Suites Berkeley by IHG

Hotel Shattuck Plaza

Hotel Shattuck Plaza
4.0 star property
22.1 km from Southeast San Rafael
8.8 out of 10, Excellent, (1082)
"Wonderful, will stay here again."
United States
Jennifer
Hotel Shattuck Plaza

DoubleTree by Hilton Hotel Berkeley Marina

DoubleTree by Hilton Hotel Berkeley Marina
4.0 star property
18.6 km from Southeast San Rafael
8.2 out of 10, Very good, (3948)
"Great place to stay!"
United States
Rafael
The price is ฿3,527
฿4,063 total
includes taxes & fees
4 Jan - 5 Jan 2026
DoubleTree by Hilton Hotel Berkeley Marina

Club Quarters Hotel in San Francisco

Club Quarters Hotel in San Francisco
4.0 star property
19.5 km from Southeast San Rafael
8.8 out of 10, Excellent, (2811)
"Clean and comfortable room, good staff, great location. "
United Kingdom
David
The price is ฿3,152
฿3,710 total
includes taxes & fees
21 Dec - 22 Dec
Club Quarters Hotel in San Francisco

Sonesta Emeryville - San Francisco Bay Bridge

Sonesta Emeryville - San Francisco Bay Bridge
3.0 star property
22.2 km from Southeast San Rafael
8.6 out of 10, Excellent, (1289)
"Great overnight stay and across the street from the Bay Street shopping district."
United States
Sasha
The price is ฿3,395
฿4,161 total
includes taxes & fees
9 Jan - 10 Jan 2026
Sonesta Emeryville - San Francisco Bay Bridge

Chancellor Hotel on Union Square

Chancellor Hotel on Union Square
3.5 star property
19.8 km from Southeast San Rafael
9.4 out of 10, Exceptional, (3077)
"Best location, friendly staff, had a wonderful time stayed! "
United States
Kalinda
The price is ฿2,381
฿2,813 total
includes taxes & fees
23 Dec - 24 Dec
Chancellor Hotel on Union Square

Hotel Caza Fisherman's Wharf

Hotel Caza Fisherman's Wharf
4.0 star property
17.7 km from Southeast San Rafael
9.0 out of 10, Wonderful, (3833)
"Excellent stay and great location! "
United States
CHRISTINE
The price is ฿3,819
฿5,938 total
includes taxes & fees
21 Dec - 22 Dec
Hotel Caza Fisherman's Wharf

Handlery Union Square Hotel

Handlery Union Square Hotel
3.5 star property
20 km from Southeast San Rafael
8.8 out of 10, Excellent, (2788)
"Clean hotel, great location, kind staff! "
United States
Felix
The price is ฿3,804
฿4,477 total
includes taxes & fees
23 Dec - 24 Dec
Handlery Union Square Hotel

Grand Hyatt San Francisco

Grand Hyatt San Francisco
4.0 star property
19.9 km from Southeast San Rafael
8.8 out of 10, Excellent, (1001)
"Staff was friendly and helpful. Rooms were clean and dining on site was convenient. "
United States
Suzanne
The price is ฿4,212
฿6,437 total
includes taxes & fees
3 Jan - 4 Jan 2026
Grand Hyatt San Francisco

King George Hotel

King George Hotel
3.0 star property
20 km from Southeast San Rafael
8.6 out of 10, Excellent, (2106)
"Great place!"
United States
Troy
The price is ฿2,687
฿3,634 total
includes taxes & fees
8 Jan - 9 Jan 2026
King George Hotel

Holiday Inn Express and Suites Fisherman's Wharf by IHG

Holiday Inn Express and Suites Fisherman's Wharf by IHG
3.0 star property
17.8 km from Southeast San Rafael
9.2 out of 10, Wonderful, (2223)
"The room was nice and clean. The staff were very friendly! We enjoyed our stay!"
United States
Theresa
The price is ฿3,741
฿5,346 total
includes taxes & fees
4 Jan - 5 Jan 2026
Holiday Inn Express and Suites Fisherman's Wharf by IHG

HYATT house Emeryville/San Francisco Bay Area

HYATT house Emeryville/San Francisco Bay Area
3.0 star property
21.9 km from Southeast San Rafael
9.2 out of 10, Wonderful, (1179)
"It was a great stay overall "
United States
LaMar
The price is ฿4,527
฿5,079 total
includes taxes & fees
26 Dec - 27 Dec
HYATT house Emeryville/San Francisco Bay Area

Hilton Garden Inn San Francisco/Oakland Bay Bridge

Hilton Garden Inn San Francisco/Oakland Bay Bridge
3.0 star property
21.6 km from Southeast San Rafael
8.8 out of 10, Excellent, (1167)
"Nice staff clean rooms"
United States
Kiran
The price is ฿3,547
฿3,980 total
includes taxes & fees
24 Dec - 25 Dec
Hilton Garden Inn San Francisco/Oakland Bay Bridge

citizenM San Francisco Union Square

citizenM San Francisco Union Square
4.0 star property
20.2 km from Southeast San Rafael
9.4 out of 10, Exceptional, (1424)
"Great location."
United States
Todd
The price is ฿3,180
฿3,742 total
includes taxes & fees
24 Dec - 25 Dec
citizenM San Francisco Union Square

Hilton San Francisco Union Square

Hilton San Francisco Union Square
4.0 star property
20.1 km from Southeast San Rafael
8.4 out of 10, Very good, (1127)
"Great stay, friendly staff, and clean room!"
United States
Maria
The price is ฿4,975
฿7,150 total
includes taxes & fees
4 Jan - 5 Jan 2026
Hilton San Francisco Union Square

Hyatt Place Emeryville/San Francisco Bay Area

Hyatt Place Emeryville/San Francisco Bay Area
3.0 star property
22.1 km from Southeast San Rafael
8.8 out of 10, Excellent, (1000)
"The entire stay was fabulous…room, breakfast, friendliness of staff, comfort and quiet!"
United States
Carol
The price is ฿3,898
฿4,373 total
includes taxes & fees
29 Dec - 30 Dec
Hyatt Place Emeryville/San Francisco Bay Area
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Southeast San Rafael

Find the best Southeast San Rafael areas for the activities you enjoy most.

Terra Linda

Terra Linda might not have many top sights, but Marin County Civic Center and American Legion Log Cabin are two attractions nearby that you can check out.

Downtown San Rafael

While visiting Downtown San Rafael, you might make a stop by sights like Mission San Rafael Arcangel and San Rafael Pacifics Albert Park.

Lucas Valley-Marinwood

If you're looking for some top things to see and do in Lucas Valley-Marinwood and surrounding area, you can visit Marin County Civic Center and Marin County Civic Center Farmers' Market.

Gerstle Park

While Gerstle Park isn't home to many top sights, Mission San Rafael Arcangel and San Rafael Pacifics Albert Park are some notable places to visit nearby.

Santa Venetia

Though Santa Venetia may not have many top sights, you can venture to the surrounding area to see attractions like Marin County Civic Center and Marin County Civic Center Farmers' Market.

Top Southeast San Rafael Hotel Reviews

Frequently asked questions

What's it like in Southeast San Rafael?
You'll be sure to have fun exploring San Rafael's Southeast San Rafael neighbourhood. Looking for sights you might find in a travel guide about Southeast San Rafael? Consider a visit to San Francisco Bay while you're in the neighbourhood.
Where is the best place to stay in Southeast San Rafael?
Based on Expedia customer reviews, Extended Stay America Suites San Rafael Francisco Blvd East is the highest ranked property in Southeast San Rafael. This hotel offers free breakfast and in-room kitchens.
If I need to cancel my hotel reservation in Southeast San Rafael, will I receive a refund?
Yes! The majority of hotel bookings are refundable provided that you cancel before the hotel's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of booking. Put your dates in and click on "Search", then use the filter option "fully refundable" to review the best deals available in Southeast San Rafael.
What is there to do around this San Rafael neighbourhood?
Popular attractions in Southeast San Rafael include San Francisco Bay. While you're out sightseeing, Marin Country Mart and Larkspur Ferry Terminal are a couple of additional sights to visit in San Rafael.