A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

Find hotels in San Juan Island, WA from ฿2,598

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13 Sep - 14 Sep
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14 Sep - 15 Sep
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18 Sep - 20 Sep
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25 Sep - 27 Sep

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Our top choices for San Juan Island hotels

1. Discovery Inn

Discovery Inn
Friday Harbor
United States
Victoria
฿5,622
฿6,221 total
includes taxes & fees
4 Oct - 5 Oct
Discovery Inn

2. The Orca Inn

The Orca Inn
Friday Harbor
United States
Andrew
฿3,212
฿3,554 total
includes taxes & fees
1 Oct - 2 Oct
The Orca Inn

3. Trumpeter Inn

Trumpeter Inn
Friday Harbor
United States
James
฿7,808
฿8,616 total
includes taxes & fees
15 Sept - 16 Sept
Trumpeter Inn

4. Snug Harbor Resort

Snug Harbor Resort
Friday Harbor
United States
Patricia
฿9,882
฿10,905 total
includes taxes & fees
8 Oct - 9 Oct
Snug Harbor Resort

5. Earthbox Inn & Spa

Earthbox Inn & Spa
Friday Harbor
United States
Nicole
฿7,602
฿8,411 total
includes taxes & fees
1 Oct - 2 Oct
Earthbox Inn & Spa

6. Friday Harbor Suites

Friday Harbor Suites
Friday Harbor
United States
Jennifer
฿6,280
฿6,948 total
includes taxes & fees
4 Oct - 5 Oct
Friday Harbor Suites

7. Friday Harbor House

Friday Harbor House
Friday Harbor
United States
Robert
฿13,058
฿14,449 total
includes taxes & fees
6 Oct - 7 Oct
Friday Harbor House

8. Roche Harbor Resort

Roche Harbor Resort
Friday Harbor
United States
Nicco
฿7,079
฿8,203 total
includes taxes & fees
15 Oct - 16 Oct
Roche Harbor Resort

9. Friday Harbor Grand B&B

Friday Harbor Grand B&B
Friday Harbor
United States
Andrew
฿12,999
฿14,383 total
includes taxes & fees
22 Sept - 23 Sept
Friday Harbor Grand B&B

10. Saturn's Return

Saturn's Return
Friday Harbor
United States
Margaret
฿11,244
฿12,407 total
includes taxes & fees
5 Oct - 6 Oct
Saturn's Return

11. Bird Rock Hotel

Bird Rock Hotel
Friday Harbor
United States
Vanessa
฿5,288
฿5,851 total
includes taxes & fees
1 Oct - 2 Oct
Bird Rock Hotel

12. Tucker House Inn

Tucker House Inn
Friday Harbor
United States
ZACHARY
฿5,326
฿5,893 total
includes taxes & fees
13 Oct - 14 Oct
Tucker House Inn

13. Deer Harbor Inn

Deer Harbor Inn
Deer Harbor
United States
Nemo
฿7,496
฿8,272 total
includes taxes & fees
16 Sept - 17 Sept
Deer Harbor Inn

14. Lopez Islander Resort

Lopez Islander Resort
Lopez Island
United States
Diane
฿5,916
฿6,528 total
includes taxes & fees
1 Oct - 2 Oct
Lopez Islander Resort

15. The Edenwild Boutique Inn

The Edenwild Boutique Inn
Lopez Island
United States
Frances
฿7,605
฿8,392 total
includes taxes & fees
15 Sept - 16 Sept
The Edenwild Boutique Inn

16. Anacortes Ship Harbor Inn

Anacortes Ship Harbor Inn
Anacortes
United States
Lisa
฿3,242
฿3,596 total
includes taxes & fees
4 Oct - 5 Oct
Anacortes Ship Harbor Inn

17. The Marina Inn

The Marina Inn
Anacortes
United States
Carol
฿5,123
฿5,747 total
includes taxes & fees
15 Sept - 16 Sept
The Marina Inn

18. Kangaroo House B&B on Orcas Island

Kangaroo House B&B on Orcas Island
Eastsound
United States
Kaitlyn
฿7,600
฿8,386 total
includes taxes & fees
16 Sept - 17 Sept
Kangaroo House B&B on Orcas Island

19. Anaco Bay Inn

Anaco Bay Inn
Anacortes
United States
Theresa
฿3,272
฿3,629 total
includes taxes & fees
15 Sept - 16 Sept
Anaco Bay Inn

20. Coachman Inn & Suites

Coachman Inn & Suites
Oak Harbor
Canada
Khou
฿4,292
฿4,777 total
includes taxes & fees
6 Oct - 7 Oct
Coachman Inn & Suites
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Stay near popular San Juan Island attractions

A marina with boats docked, surrounded by forested hills and a town with buildings.

Roche Harbor Marina

9.4/10 (332 reviews)
Explore the waterfront in Roche Harbor with a trip to Roche Harbor Marina. While you're in the area, stroll along the seaside.
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A lighthouse on a rocky coastline with the ocean in the foreground.

Lime Kiln Point State Park

9.6/10 (317 reviews)
Also known as Whale Watch Park, this diving site is one of the best places in the world to view wild orca pods from the shore.
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A lighthouse on a rocky cliff by the sea.

San Juan Island National Historic Park

9.4/10 (184 reviews)
You can learn about the history of Friday Harbor when you stop by San Juan Island National Historic Park. While you're in the area, stroll along the waterfront.
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People preparing kayaks on a riverbank with a small office and a red-roofed building in the background.

San Juan County Park

9.0/10 (87 reviews)
A hotspot for kayakers, this scenic and diverse campsite is the perfect retreat for both those wanting to relax and adventurists.
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A landscaped garden with geometric hedges, a flagpole with a flag, and a body of water in the background.

English Camp

9.2/10 (153 reviews)
More than 150 years ago, the British Army prepared for battle on this site during the Pig War. Now, it’s a thought-provoking homage to the islands’ dramatic history.
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San Juan Islands Sculpture Park

8.8/10 (144 reviews)
Explore the great outdoors at San Juan Islands Sculpture Park, a lovely green space in Roche Harbor. While you're in the area, stroll along the seaside.
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Whale Museum

8.8/10 (89 reviews)
You can spend an afternoon studying the exhibits at Whale Museum during your trip to Friday Harbor. While you're in the area, stroll along the waterfront.
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San Juan Islands Museum of Art

8.4/10 (22 reviews)
You can spend an afternoon exploring the galleries in San Juan Islands Museum of Art during your travels in Friday Harbor. While you're in the area, stroll along the waterfront.
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Learn more about San Juan Island

San Juan Island entices visitors with its quaint harbor towns, forest trails and the chance to see a range of wildlife, including endangered orcas.

See all hotels in San Juan Island
A marina with numerous boats docked, a wooden pier, and a forested hill in the background.

Top San Juan Island Hotel Reviews

Friday Harbor Suites

Friday Harbor Suites

10/10 Excellent
"Room is clean and staff is very helpful."
Bei 2-night trip
Posted 4 hours ago
Friday Harbor Suites
Coachman Inn & Suites

Coachman Inn & Suites

8/10 Good
"Pretty decent spot for the area. Will definitely stay again next time I’m in town"
Sara 2-night trip
Posted 4 hours ago
Coachman Inn & Suites
The Orca Inn

The Orca Inn

10/10 Excellent
"Perfect size and close to town."
Thomas 3-night trip
Posted 8 hours ago
The Orca Inn
Earthbox Inn & Spa

Earthbox Inn & Spa

10/10 Excellent
"Great place, good location. Peaceful grounds. Nice coffee shop in the courtyard. I would stay here again."
Amy 2-night trip
Posted 12 hours ago
Earthbox Inn & Spa
Rosario Resort

Rosario Resort

10/10 Excellent
"There is a front desk down at the main office, but most assistance is provided remotely 24/7 by the app or text. They are very responsive. We stayed in the Roundhouse right on the cove, the view was amazing and we really enjoyed it. We arrived at the end of the season and it was very quiet."
Melissa Ann 6-night trip
Posted 12 hours ago
Rosario Resort
The Marina Inn

The Marina Inn

10/10 Excellent
"We enjoyed our stay at the Marina hotel. Everyone was so kind and friendly and the rooms were clean and comfortable."
Nathan 1-night trip
Posted 20 hours ago
The Marina Inn
Discovery Inn

Discovery Inn

10/10 Excellent
"This place shines with all the personal touches…fresh flowers, slippers and robes, coffee station. It’s apparent that it is an on hands owner who focuses on the details."
Chris 3-night trip
Posted 1 day ago
Discovery Inn
Roche Harbor Resort

Roche Harbor Resort

8/10 Good
"It’s a very old building so it’s expected that there are issues, but many of them are maintenance or replacement cycle issues. For instance the carpet is so old and dirty that it is actually wearing through in places. The room was clean and the bed and pillows were comfortable. The staff was very nice and helped make our first trip to Roche Harbor a pleasant experience."
Gregg 2-night trip
Posted 1 day ago
Roche Harbor Resort
Inn to the Woods B&B

Inn to the Woods B&B

10/10 Excellent
"The most charming B&B with a private hot tub, delicious breakfast, wonderful hosts, and 2 very cute dogs"
Betsy 3-night trip
Posted 3 days ago
Inn to the Woods B&B

More cheap stays in San Juan Island

Cap Sante Inn

Cap Sante Inn

906 9th St Anacortes WA
฿1,847
฿2,598 total
30 Sept - 1 Oct
includes taxes & fees
Cap Sante Inn
The Orca Inn

The Orca Inn

770 Mullis St Friday Harbor WA
฿3,212
฿3,554 total
1 Oct - 2 Oct
includes taxes & fees
8.2/10 Very good! (144 reviews)
The Orca Inn
Auld Holland Inn

Auld Holland Inn

33575 State Route 20 Oak Harbor WA
฿3,216
฿3,580 total
8 Oct - 9 Oct
includes taxes & fees
Auld Holland Inn
Anacortes Inn

Anacortes Inn

3006 Commercial Ave Anacortes WA
฿3,933
฿4,428 total
14 Oct - 15 Oct
includes taxes & fees
Anacortes Inn
Coachman Inn & Suites

Coachman Inn & Suites

32959 Highway 20 Oak Harbor WA
฿4,292
฿4,777 total
6 Oct - 7 Oct
includes taxes & fees
9.2/10 Wonderful! (1,016 reviews)
Coachman Inn & Suites
The Marina Inn

The Marina Inn

3300 Commercial Ave Anacortes WA
฿5,123
฿5,747 total
15 Sept - 16 Sept
includes taxes & fees
9.6/10 Exceptional! (1,007 reviews)
The Marina Inn

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