Find hotels in Yankton, SD from ฿2,649

Start date: Check-in selected.
To Date
End date: Check-out

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Tonight
24 Dec - 25 Dec
Tomorrow
25 Dec - 26 Dec
This weekend
26 Dec - 28 Dec
Next weekend
2 Jan - 4 Jan

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Yankton hotels

Exterior
Holiday Inn Express & Suites Yankton by IHG

Holiday Inn Express & Suites Yankton by IHG

Holiday Inn Express & Suites Yankton by IHG
2.5 star property
Yankton
9.2 out of 10, Wonderful, (416)
"Yes, clean room "
United States
Evyonne
The price is ฿3,142
฿3,633 total
includes taxes & fees
15 Jan - 16 Jan 2026
Holiday Inn Express & Suites Yankton by IHG
Lobby
Fairfield Inn & Suites by Marriott Yankton

Fairfield Inn & Suites by Marriott Yankton

Fairfield Inn & Suites by Marriott Yankton
2.5 star property
Yankton
9.4 out of 10, Exceptional, (156)
"Great place to stay "
United States
Elizabeth
The price is ฿3,702
฿4,086 total
includes taxes & fees
11 Jan - 12 Jan 2026
Fairfield Inn & Suites by Marriott Yankton
Lobby
Best Western Kelly Inn

Best Western Kelly Inn

Best Western Kelly Inn
2.5 star property
Yankton
8.0 out of 10, Very good, (650)
"Very comfortable room and quiet we luv staying at your hotel oyr dog luvs it too breakfast is wonderful also luv hit tub!!!"
United States
Valerie
The price is ฿3,048
฿3,375 total
includes taxes & fees
31 Dec - 1 Jan 2026
Best Western Kelly Inn
Room, 1 King Bed, Accessible, Non Smoking | Premium bedding, down duvets, desk, laptop workspace
Comfort Inn Yankton SD

Comfort Inn Yankton SD

Comfort Inn Yankton SD
2.5 star property
Yankton
8.8 out of 10, Excellent, (673)
"Affordable with very clean, comfortable rooms, super friendly staff and a nice breakfast. "
United States
Roberta
The price is ฿2,750
฿3,051 total
includes taxes & fees
30 Dec - 31 Dec
Comfort Inn Yankton SD
Family House, 4 Bedrooms, Lake View, Lakeside | Living area | 32-inch LCD TV with digital channels, TV
Lewis and Clark Resort

Lewis and Clark Resort

Lewis and Clark Resort
2.5 star property
Yankton
8.8 out of 10, Excellent, (284)
"Beautiful view, easy check in, and spacious accommodations! We loved our stay and can’t wait to come back!"
United States
Jessica
The price is ฿2,926
฿3,092 total
includes taxes & fees
28 Dec - 29 Dec
Lewis and Clark Resort
Room, 2 Queen Beds, Non Smoking | Desk, blackout curtains, free WiFi, bed sheets
Yankton Inn

Yankton Inn

Yankton Inn
2.0 star property
Yankton
7.6 out of 10, Good, (273)
"Clean room, low pet fee, quiet."
United States
Joseph
The price is ฿2,644
฿2,936 total
includes taxes & fees
25 Dec - 26 Dec
Yankton Inn
Exterior
Econo Lodge Inn & Suites Yankton

Econo Lodge Inn & Suites Yankton

Econo Lodge Inn & Suites Yankton
2.0 star property
Yankton
7.2 out of 10, Good, (709)
"Yes the room was clean staff was great"
United States
John
The price is ฿2,380
฿2,649 total
includes taxes & fees
31 Dec - 1 Jan 2026
Econo Lodge Inn & Suites Yankton
Exterior
Best Western Vermillion Inn

Best Western Vermillion Inn

Best Western Vermillion Inn
2.5 star property
Vermillion
8.8 out of 10, Excellent, (559)
"Clean rooms and friendly and helpful staff"
United States
Russell
The price is ฿2,986
฿3,308 total
includes taxes & fees
11 Jan - 12 Jan 2026
Best Western Vermillion Inn
Suite, 1 King Bed, Non Smoking | Premium bedding, individually furnished, desk, laptop workspace
Cobblestone Inn & Suites - Hartington

Cobblestone Inn & Suites - Hartington

Cobblestone Inn & Suites - Hartington
2.5 star property
Hartington
9.2 out of 10, Wonderful, (303)
"Clean room, friendly staff"
United States
Marvin
The price is ฿3,359
฿3,897 total
includes taxes & fees
29 Dec - 30 Dec
Cobblestone Inn & Suites - Hartington
Interior
The Historic Argo Hotel

The Historic Argo Hotel

The Historic Argo Hotel
3.0 star property
Crofton
The price is ฿5,879
฿6,585 total
includes taxes & fees
25 Dec - 26 Dec
The Historic Argo Hotel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Stay near popular Yankton attractions

Aerial view of a cathedral near the Missouri river in Yankton, South Dakota

Mount Marty College

Perched on bluffs overlooking the Missouri River, this Benedictine Catholic university offers a serene 80-acre campus. Visitors can explore the striking Bishop Marty Memorial Chapel and enjoy peaceful riverside pathways.
See properties
Aerial view of a cathedral near the Missouri river in Yankton, South Dakota

Riverside Park

4.4/5 (41 reviews)
Riverside Park hugs the Missouri River with scenic trails and peaceful green spaces perfect for contemplation. Enjoy fishing from the riverbank or bring a picnic to savour while watching boats glide by on the water.
See properties

Learn more about Yankton

Lewis and Clark's historic trail winds through this riverside city where kayaking the Missouri River is a must-do adventure. Visit the Dakota Territorial Museum and catch a sunset at Gavins Point Dam where locals gather for evening picnics.

See all hotels in Yankton
MERIDIAN HIGHWAY BRIDGE, YANKTON SOUTH DAKOTA

Top Yankton Hotel Reviews

More cheap stays in Yankton

Econo Lodge Inn & Suites

Econo Lodge Inn & Suites

2410 Broadway Ave Yankton SD
The price is ฿2,380 per night from 31 Dec to 1 Jan
฿2,380
฿2,649 total
31 Dec - 1 Jan 2026
includes taxes & fees
7.2/10 Good! (707 reviews)

Frequently asked questions

Where is the best place to stay in Yankton?
Fairfield Inn & Suites by Marriott Yankton is ranked highly by Expedia customers. This hotel offers free breakfast and an indoor pool. Traveller reviews also recommend Lewis and Clark Resort and Holiday Inn Express & Suites Yankton by IHG as top options for your visit. See all available top hotels, or vacation rentals in Yankton.
If I need to cancel my hotel reservation in Yankton, will I receive a refund?
Yes, most hotel reservations are fully refundable if you cancel prior to the hotel's cancellation deadline, which is usually within 24-48 hours of your arrival date. If you booked a non-refundable reservation, you might be able to still cancel and receive a refund within a 24-hour period of booking. Filter your search by fully refundable to find flexible hotel deals in Yankton.
What's the best family accommodation in Yankton?
Econo Lodge Inn & Suites Yankton is a hotel with an indoor pool and free parking, and it's a top choice on Expedia for families. Fairfield Inn & Suites by Marriott Yankton is another good option for your stay with the kids. Find more child-friendly accommodations in Yankton.
What's the best LGBTQ-friendly place to stay in Yankton?
Holiday Inn Express & Suites Yankton by IHG is a top LGBTQ-friendly hotel, and features free breakfast and free WiFi. See all available hotels listed as LGBTQ-friendly in Yankton.
What's the best dog-friendly hotel in Yankton?
Econo Lodge Inn & Suites Yankton is a top dog-friendly hotel, and offers an indoor pool along with free WiFi for its human guests. Other good options for you and your pet include Best Western Kelly Inn and Lewis and Clark Resort. See more pet-friendly hotel accommodations in Yankton.
What's the best place to stay for a beach holiday in Yankton?
Lewis and Clark Resort is a top hotel with a seasonal outdoor pool and free WiFi, and it's located close to the beach . See more stays near the beach in Yankton.
What are some accommodation options with pools in Yankton?
Best Western Kelly Inn: Offers a children's pool, an indoor pool and daily. Fairfield Inn & Suites by Marriott Yankton and Econo Lodge Inn & Suites Yankton are two additional hotels that offer an on-site pool. View all hotels with pools in Yankton.
What's it like to stay in Yankton?
Families enjoy visiting Yankton, although all visitors will definitely find something to appreciate. Tourists can also enjoy the city's sporting events and riverfront. In Yankton, there are 62 hotels and other accommodation options to choose from. Find out more about Yankton.
What is there to see in Yankton?
Cultural venues include G.A.R. Hall, Riverside Park Amphitheatre and Dakota Territorial Museum. Natural beauty is on display at Lewis and Clark Recreation Area, Gavins Point Recreation Area and Lewis and Clark Lake. A couple of additional sights to add to your itinerary are Mead Museum and Lewis & Clark Marina. Take a look at what more there is to see and do in Expedia's Yankton guide.
What's the seasonal weather in Yankton?
The hottest months are usually July and August, with an average temperature of 22°C, while the coldest months are January and February, with an average of -3°C. The snowiest months in Yankton are January, December, October and March, with each month seeing an average of 20 cm of snowfall.

Explore a world of travel with Expedia