What is Mission Bay like?

You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.

What's a favourite hotel to stay in Mission Bay?

Based on our traveller data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort offers a marina and 5 outdoor pools. Other good options for your stay in the neighbourhood include Hyatt Regency Mission Bay Spa and Marina and The Dana on Mission Bay .

How many hotels should I expect to find in the Mission Bay area?

If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.

If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?

Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.

What is there to do around this San Diego neighbourhood?

Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighbourhood. Mission Beach and Hotel Circle are some popular places to visit in the area around Mission Bay. When you're sightseeing in San Diego, Bahia Point Beach and Bay City Brewing Co. are also worth a stop.

The Best Hotels in Mission Bay, San Diego - 2026 Updated Prices

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Our top choices for Mission Bay hotels

Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)

San Diego Mission Bay Resort

Mission Bay

Jean-Michelle

฿8,608 total

includes taxes & fees

27 May - 28 May

5 outdoor pools, a heated pool, pool umbrellas, pool loungers

Paradise Point Resort & Spa

Mission Bay

Raymond

฿10,904 total

includes taxes & fees

2 Jun - 3 Jun

2 outdoor pools, a heated pool, pool loungers

The Dana on Mission Bay

Mission Bay

René

฿8,037 total

includes taxes & fees

27 May - 28 May

3 outdoor pools, pool cabanas (surcharge), pool umbrellas

Hyatt Regency Mission Bay Spa and Marina

Mission Bay

Hanna

฿8,638 total

includes taxes & fees

26 May - 27 May

Hampton Inn & Suites San Diego Airport Liberty Station

5.3 km from Mission Bay

Patricia

฿6,671 total

includes taxes & fees

7 Jun - 8 Jun

Premium bedding, in-room safe, desk, laptop workspace

Best Western Plus Marina Gateway Hotel

16.7 km from Mission Bay

Ines

฿5,364 total

includes taxes & fees

24 May - 25 May

Best Western Americana Inn

28.6 km from Mission Bay

Nancy

฿4,219 total

includes taxes & fees

28 May - 29 May

Down duvets, Select Comfort beds, desk, laptop workspace

Ramada by Wyndham San Diego Poway Miramar

24.7 km from Mission Bay

Cherie

฿3,039 total

includes taxes & fees

25 May - 26 May

Comfort Inn Chula Vista San Diego South

20.6 km from Mission Bay

Victoria

฿3,763 total

includes taxes & fees

14 Jun - 15 Jun

La Quinta Inn by Wyndham San Diego Chula Vista

20.7 km from Mission Bay

Helda

฿3,849 total

includes taxes & fees

25 May - 26 May

Desk, laptop workspace, iron/ironing board, free WiFi

Days Inn by Wyndham San Diego-East/El Cajon

25.7 km from Mission Bay

Trenton

฿3,208 total

includes taxes & fees

25 May - 26 May

Ayres Hotel San Diego South - Chula Vista

29.6 km from Mission Bay

Paul

฿6,772 total

includes taxes & fees

7 Jun - 8 Jun

TownePlace Suites by Marriott San Diego Airport/Liberty Station

5.2 km from Mission Bay

Derek

฿7,098 total

includes taxes & fees

25 May - 26 May

Holiday Inn Express San Diego Airport - Old Town by IHG

4.8 km from Mission Bay

Amelia

฿5,295 total

includes taxes & fees

26 May - 27 May

Studio Suite, 1 King Bed with Sofa bed, Balcony | View from room

Sheraton San Diego Resort

6 km from Mission Bay

michelle

฿7,999 total

includes taxes & fees

26 May - 27 May

Best Western Plus La Mesa San Diego

21.6 km from Mission Bay

Farrell

฿4,695 total

includes taxes & fees

31 May - 1 Jun

Best Western San Diego/Miramar Hotel

16.1 km from Mission Bay

Kimberly

฿3,714 total

includes taxes & fees

28 May - 29 May

Country Inn & Suites by Radisson, San Diego North, CA

13.8 km from Mission Bay

David

฿6,029 total

includes taxes & fees

28 May - 29 May

Courtyard by Marriott San Diego El Cajon

24.5 km from Mission Bay

Shana

฿5,628 total

includes taxes & fees

31 May - 1 Jun

Lamplighter Inn & Suites at SDSU

15.3 km from Mission Bay

Michael

฿4,903 total

includes taxes & fees

25 May - 26 May

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Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

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Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

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Mission Beach

If you're spending some time in Mission Beach, Mission Bay and Mission Beach are top sights worth seeing.

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Gaslamp Quarter

San Diego’s historic heart has shed its seedy past to emerge as one of the city’s premier dining, shopping and entertainment hubs.

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Ocean Beach

Ocean Beach is beloved for its stunning beaches. Take some time to explore sights in the area like Ocean Beach and Dog Beach.

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Top Mission Bay Hotel Reviews

Hard Rock Hotel San Diego

6/10 Okay

"first I bought 2 suites for my daughter's graduation. then on arrival they separated us to two different sides of hotel. one room with balcony faced all the air conditioning on top of joining building. disgusting view with loud units. The furniture has stains and wear. the sliding bath door was hanging at end not properly closing. It had water damage at edge. water pressure in one room would only go hot. The pool being at a Hardrock was only 4 ft deep and small. ( they throw pool parties there) Very little arrival parking area. The tile is delaminating from concrete throughout the hotel. loose tiles. I felt ripped off for money we spent on 2 rooms. As for the area. can't go a block with crazy amount of homeless which some harassed my daughter and boyfriend. stunk like pee everywhere . San Diego is letting down its tourists and residents big-time. so much I won't go back. dirty city. the next LA"