What is Mission Bay like?

You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.

What's a favourite hotel to stay in Mission Bay?

Based on our traveller data, San Diego Mission Bay Resort is one of the top choices for your stay in Mission Bay. This resort offers a full-service spa and 2 restaurants. Other good options for your stay in the neighbourhood include Paradise Point Resort & Spa and The Dana on Mission Bay .

How many hotels should I expect to find in the Mission Bay area?

If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.

If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?

Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.

What is there to do around this San Diego neighbourhood?

Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighbourhood. Mission Beach and Hotel Circle are some popular places to visit in the area around Mission Bay. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.

The Best Hotels in Mission Bay, San Diego - 2026 Updated Prices

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Our top choices for Mission Bay hotels

Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)

San Diego Mission Bay Resort

Mission Bay

Jean-Michelle

฿12,629 total

includes taxes & fees

14 Jun - 15 Jun

5 outdoor pools, a heated pool, pool umbrellas, pool loungers

Paradise Point Resort & Spa

Mission Bay

Daniel

฿11,658 total

includes taxes & fees

14 Jun - 15 Jun

3 outdoor pools, pool cabanas (surcharge), pool umbrellas

Hyatt Regency Mission Bay Spa and Marina

Mission Bay

Yesenia

฿10,217 total

includes taxes & fees

17 Jun - 18 Jun

2 outdoor pools, a heated pool, pool loungers

The Dana on Mission Bay

Mission Bay

René

฿9,952 total

includes taxes & fees

15 Jun - 16 Jun

Crowne Plaza San Diego - Mission Valley by IHG

4 km from Mission Bay

amanda

฿4,724 total

includes taxes & fees

29 Jun - 30 Jun

Best Western Americana Inn

28.6 km from Mission Bay

Nancy

฿4,563 total

includes taxes & fees

14 Jun - 15 Jun

3 bars/lounges, lobby lounge, cocktail bar, cocktail bar

Lafayette Hotel & Club

8.1 km from Mission Bay

Roxana

฿9,387 total

includes taxes & fees

16 Jun - 17 Jun

Premium bedding, in-room safe, desk, laptop workspace

Best Western Plus Marina Gateway Hotel

16.7 km from Mission Bay

Cameron

฿5,464 total

includes taxes & fees

10 Jun - 11 Jun

Holiday Inn Express San Diego South - Chula Vista by IHG

19.3 km from Mission Bay

Lingzhi

฿5,489 total

includes taxes & fees

8 Jun - 9 Jun

Studio Suite, 1 King Bed with Sofa bed, Balcony | View from room

Sheraton San Diego Resort

6 km from Mission Bay

Beverly A

฿7,660 total

includes taxes & fees

5 Jul - 6 Jul

Hampton Inn & Suites San Diego Airport Liberty Station

5.3 km from Mission Bay

Patricia

฿6,461 total

includes taxes & fees

30 Jun - 1 Jul

Embassy Suites by Hilton San Diego Bay Downtown

8.7 km from Mission Bay

Francesca Elisa

฿8,525 total

includes taxes & fees

7 Jul - 8 Jul

Bahia Resort Hotel

Central Mission Beach, 2.3 km from Mission Bay

Oswaldo

฿8,921 total

includes taxes & fees

10 Jun - 11 Jun

3 restaurants; breakfast, lunch and dinner served

Wyndham San Diego Bayside

8 km from Mission Bay

Debra

฿7,948 total

includes taxes & fees

8 Jun - 9 Jun

Premium bedding, desk, blackout curtains, soundproofing

Valli Hi Motel

28.8 km from Mission Bay

Allan

฿3,364 total

includes taxes & fees

8 Jun - 9 Jun

Down duvets, Select Comfort beds, desk, laptop workspace

Ramada by Wyndham San Diego Poway Miramar

24.7 km from Mission Bay

Jacquie

฿4,593 total

includes taxes & fees

14 Jun - 15 Jun

Best Western San Diego/Miramar Hotel

16.1 km from Mission Bay

Jessica

฿4,795 total

includes taxes & fees

14 Jun - 15 Jun

Courtyard by Marriott San Diego Airport/Liberty Station

5 km from Mission Bay

Rosemary

฿6,697 total

includes taxes & fees

14 Jun - 15 Jun

Holiday Inn Express San Diego Airport - Old Town by IHG

4.8 km from Mission Bay

Amelia

฿6,032 total

includes taxes & fees

8 Jun - 9 Jun

Best Western Plus Hacienda Hotel Old Town

Old Town San Diego, 3.7 km from Mission Bay

Mark

฿5,398 total

includes taxes & fees

8 Jun - 9 Jun

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Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and USS Midway Museum are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

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Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

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