Search Hotels Near Mission Bay, San Diego

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

This weekend
Next weekend

Filter by

Guest rating

Selecting then applying a filter from this group will update the results on a new page

Star rating

Our top choices for Mission Bay hotels

1. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay, 1.6 km from Mission Bay
9.0 out of 10, Wonderful, (4,361 reviews)
"Beautiful property, very helpful staff, great location"
United States
Jamie
The price is ฿8,664
฿10,921 total
includes taxes & fees
29 Jun - 30 Jun
The Dana on Mission Bay

2. ITH Mission Beach Backpacker Hostel

ITH Mission Beach Backpacker Hostel
2.0 star property
Central Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (221 reviews)
"amazing vibe at this hostel."
Canada
Julien
The price is ฿4,785
฿5,395 total
includes taxes & fees
28 Jun - 29 Jun
ITH Mission Beach Backpacker Hostel

3. Boardwalk Hotel: Bikes, Boards & Beach Gear Included

Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (395 reviews)
"Location was great"
United States
Amanda
The price is ฿9,002
฿10,150 total
includes taxes & fees
28 Jun - 29 Jun
Boardwalk Hotel: Bikes, Boards & Beach Gear Included

4. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay, 1.5 km from Mission Bay
8.6 out of 10, Excellent, (1,494 reviews)
"We have stayed here before, good location, clean rooms, great staff."
United States
Lance
The price is ฿8,999
฿12,113 total
includes taxes & fees
28 Jun - 29 Jun
San Diego Mission Bay Resort

5. The Wayfarer San Diego

The Wayfarer San Diego
4.0 star property
Mission Beach, 3 km from Mission Bay
9.4 out of 10, Exceptional, (1,806 reviews)
"We love the location and the pool and hot tub were great. Having direct beach access was the best part of our trip. Will visit again!"
United States
Lily
The price is ฿11,950
฿13,736 total
includes taxes & fees
28 Jun - 29 Jun
The Wayfarer San Diego

6. Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2 km from Mission Bay
8.8 out of 10, Excellent, (2,187 reviews)
"Beachfront rooms were great."
United States
Jon
The price is ฿8,400
฿11,510 total
includes taxes & fees
29 Jun - 30 Jun
Bahia Resort Hotel

7. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
3.2 km from Mission Bay
9.2 out of 10, Wonderful, (1,060 reviews)
"Great location and hotel. Parking is limited, breakfast area is too congested for the size of the hotel. Would stay again"
United States
Gretchen
The price is ฿5,479
฿6,297 total
includes taxes & fees
28 Jun - 29 Jun
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

8. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.5 km from Mission Bay
8.8 out of 10, Excellent, (1,001 reviews)
"Clean room, great breakfast and amazing staff"
United States
Angeline
The price is ฿7,192
฿8,267 total
includes taxes & fees
1 Jul - 2 Jul
Holiday Inn Express San Diego - SeaWorld Area by IHG

9. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay, 1.9 km from Mission Bay
8.4 out of 10, Very good, (1,632 reviews)
"Amazing place!"
United States
Yesenia
The price is ฿6,657
฿9,422 total
includes taxes & fees
28 Jun - 29 Jun
Hyatt Regency Mission Bay Spa and Marina

10. Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Fairfield Inn & Suites by Marriott San Diego Pacific Beach
3.0 star property
Pacific Beach, 2.9 km from Mission Bay
8.8 out of 10, Excellent, (918 reviews)
"Great service from start to finish and very clean hotel "
United States
Jesus
The price is ฿4,349
฿4,999 total
includes taxes & fees
2 Jul - 3 Jul
Fairfield Inn & Suites by Marriott San Diego Pacific Beach

11. Best Western San Diego Pacific Beach/Mission Bay

Best Western San Diego Pacific Beach/Mission Bay
2.5 star property
Bay Park, 2.5 km from Mission Bay
8.2 out of 10, Very good, (442 reviews)
"Location was great!"
United States
Richard
The price is ฿4,655
฿5,351 total
includes taxes & fees
7 Jul - 8 Jul
Best Western San Diego Pacific Beach/Mission Bay

12. Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
3.2 km from Mission Bay
8.6 out of 10, Excellent, (3,808 reviews)
"Nice staff and good breakfast"
United States
Fernando
The price is ฿4,449
฿5,114 total
includes taxes & fees
30 Jun - 1 Jul
Comfort Inn Sea World Area

13. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,186 reviews)
"THE BED WAS SO SOFT ROOM WAS SO CLEAN BREAKFAST WAS GREAT AND THE PRICE WAS KILLER FOR THE LOCATION really a great place to stay"
United States
Tyson
The price is ฿4,712
฿5,416 total
includes taxes & fees
2 Jul - 3 Jul
GreenTree Inn San Diego Mission Bay

14. Surfer Beach Hotel

Surfer Beach Hotel
3.0 star property
Pacific Beach, 3 km from Mission Bay
8.2 out of 10, Very good, (1,321 reviews)
"Great place to stay."
United States
Aleta
The price is ฿9,581
฿10,821 total
includes taxes & fees
29 Jun - 30 Jun
Surfer Beach Hotel

15. SureStay Hotel by Best Western San Diego Pacific Beach

SureStay Hotel by Best Western San Diego Pacific Beach
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (1,568 reviews)
"The room was clean and front desk staff was great Breakfast was good"
United States
NORALYN
The price is ฿4,269
฿4,821 total
includes taxes & fees
29 Jun - 30 Jun
SureStay Hotel by Best Western San Diego Pacific Beach

16. ITH Beach Bungalow Surf Hostel

ITH Beach Bungalow Surf Hostel
2.0 star property
Pacific Beach, 3.2 km from Mission Bay
8.0 out of 10, Very good, (264 reviews)
"Amazing staff! Great vibes! I will definitely be returning"
United States
mike
The price is ฿2,374
฿2,677 total
includes taxes & fees
22 Jul - 23 Jul
ITH Beach Bungalow Surf Hostel

17. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.8 km from Mission Bay
7.4 out of 10, Good, (4,157 reviews)
"Clean room, staff was very helpful, parking was easy and accessible!"
United States
Hector
The price is ฿4,315
฿4,960 total
includes taxes & fees
1 Jul - 2 Jul
Wyndham Garden San Diego Near SeaWorld

18. Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.5 km from Mission Bay
7.2 out of 10, Good, (1,556 reviews)
"Great stay"
United States
Alyssa
The price is ฿2,410
฿2,770 total
includes taxes & fees
7 Jul - 8 Jul
Heritage Inn San Diego

19. E-Z 8 Motel Old Town

E-Z 8 Motel Old Town
2.5 star property
Old Town San Diego, 3.1 km from Mission Bay
6.6 out of 10, (2,117 reviews)
"Great bang for your buck!"
United States
Ashley
The price is ฿2,602
฿2,990 total
includes taxes & fees
7 Jul - 8 Jul
E-Z 8 Motel Old Town

20. Mission Bay Motel

Mission Bay Motel
Pacific Beach, 3 km from Mission Bay
6.2 out of 10, (92 reviews)
"The location was great can't beat it for the price."
United States
Juan C
The price is ฿3,613
฿4,074 total
includes taxes & fees
28 Jun - 29 Jun
Mission Bay Motel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Compare popular hotels close to Mission Bay

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
2 outdoor pools, a heated pool, pool loungers
The Dana on Mission Bay
3.5 star property
9.0
Wonderful
4,361 reviews
View
Beach nearby, 5 beach bars
ITH Mission Beach Backpacker Hostel
2.0 star property
9.4
Exceptional
221 reviews
View
Exterior
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
9.4
Exceptional
395 reviews
View
Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)
San Diego Mission Bay Resort
4.0 star property
8.6
Excellent
1,494 reviews
View
Outdoor pool, a heated pool
The Wayfarer San Diego
4.0 star property
9.4
Exceptional
1,806 reviews
View

Top Mission Bay Hotel Reviews

Hotels near other Mission Bay attractions

Find out more about Mission Bay

Top reasons to visit Mission Bay

  • Stunning Beaches: Mission Bay boasts beautiful beaches with soft sand and inviting waters, perfect for relaxation and fun.
  • Adventure Activities: Enjoy thrilling experiences like whalewatching, dolphin encounters, and tennis at local courts.
  • Scenic Boardwalk: The vibrant boardwalk offers a lovely spot for leisurely strolls with stunning views of the bay.
  • Family-Friendly Atmosphere: Mission Bay is ideal for families, providing a range of outdoor activities and cultural experiences.
  • Diverse Accommodation: Choose from various pet-friendly and family-oriented hotels and resorts for a memorable stay.

Find great hotels near Mission Bay

Experience the charm of Mission Bay with a variety of accommodation options tailored to your needs. Whether you seek adventure, a pet-friendly retreat, or a family-friendly experience, Mission Bay offers an array of hotels and apartments. From the renowned San Diego Mission Bay Resort to delightful Mission Beach hotels, you are sure to find the perfect base for your holiday, ensuring a memorable stay by the stunning Californian coastline.

  • Days Inn by Wyndham San Diego Hotel Circle: This 3-star hotel offers a welcoming atmosphere for adventurous travellers, located a short distance of 6km from Mission Bay. With a guest rating of 8.0 out of 10, it caters to both business and leisure visitors, including pet-friendly options. Guests can enjoy a variety of adventure sports nearby such as kayaking, windsurfing, and surfing. The hotel features essential amenities and a pet policy that accommodates dogs, making it an appealing choice for those travelling with furry companions.
  • Best Western Seven Seas: Also rated 3 stars, Best Western Seven Seas stands at an accessible distance of 6km from Mission Bay. This hotel is ideal for families and adventurers alike. Offering a range of recreational activities nearby, such as parasailing and snorkelling, it ensures that guests can engage in exciting experiences. The hotel also provides free cribs for families with young children, making it a practical option for parents seeking comfort and convenience during their stay.
  • Paradise Point Resort & Spa: With a 4-star rating and a commendable guest rating of 8.8 out of 10, Paradise Point Resort & Spa is just 1km from Mission Bay, making it a prime location for beach enthusiasts. This resort boasts direct access to the beautiful beach, allowing guests to enjoy sun-soaked days and tranquil ocean views. The property’s array of luxurious amenities and serene atmosphere offers a perfect retreat for those seeking relaxation and natural beauty during their vacation.

Where to stay near Mission Bay

Mission Bay, San Diego, offers a delightful blend of family-friendly activities and picturesque scenery. As you explore the vibrant Mission Beach and nearby neighbourhoods, you'll encounter welcoming locals and an array of historical sites. This budget-friendly destination is perfect for families seeking fun and relaxation at the beach resort, all while soaking in the stunning coastal views of Mission Bay. Prepare for an unforgettable experience filled with adventure and camaraderie.

  • San Diego: As the vibrant city that encompasses Mission Bay, San Diego offers an array of experiences for visitors. Its visitor numbers are fairly steady, with peaks in the spring and summer months. Renowned for its family-friendly atmosphere, the city boasts stunning beaches, educational attractions, and exciting shopping centres. Highlights include the world-famous San Diego Zoo, Balboa Park, and the picturesque waterfront, making it a perfect destination for outdoor enthusiasts and families alike.
  • Pacific Beach: Situated a mere 3km from Mission Bay, Pacific Beach is a lively neighbourhood known for its vibrant beach culture. With a moderately seasonal influx of visitors, especially during the spring and summer, this area is ideal for outdoor and family activities. Stroll along the scenic boardwalk, explore eclectic shops, or relax on the sandy shores. The local attractions, such as the Pacific Beach Pier and the beautiful bay, offer a perfect backdrop for a fun-filled day by the sea.
  • Mission Beach: Also located 3km from Mission Bay, Mission Beach is a charming neighbourhood that captivates visitors year-round. With peaks in March and summer, it’s the go-to spot for those seeking a beachside escape. Families flock here for its picturesque boardwalk and the nearby amusement park, Belmont Park. Enjoy a day filled with sun, surf, and sand, while being surrounded by vibrant eateries and shops, all contributing to the laid-back yet lively atmosphere.

Things to do near Mission Bay

Shopping

Mission Bay offers charming local shops for unique souvenirs. For a wider selection, you can visit Fashion Valley Mall, around 16km away, featuring popular brands and boutiques. If you're up for a drive, consider Westfield UTC, about 19km away, where you’ll find diverse shopping options.

Recreation

In Mission Bay, indulge in rejuvenating treatments at the Catamaran Spa, where ocean views enhance your relaxation. Alternatively, visit the La Jolla Spa, offering holistic therapies and yoga sessions that harmonise mind and body amidst serene coastal surroundings.

Adventure

Barona Speedway offers thrilling motor racing experiences 43km from Mission Bay. Feel the adrenaline rush as you watch high-speed races in an electrifying atmosphere, perfect for those seeking excitement and adventure in a vibrant sports setting.

Nightlife

Explore the lively atmosphere at The Mission Bay Yacht Club, where you can enjoy cocktails while overlooking the water. For a vibrant night out, visit the Crown Point Coffee for a relaxed vibe with live music and tasty treats.

*Distances are measured in a straight line; actual driving distances may vary depending on the route.

Find the best attractions near Mission Bay

Mission Bay in San Diego, California, offers an array of attractions for tourists, including beautiful beaches, urban parks, and the maritime museum. Visitors can enjoy cultural experiences and outdoor activities suitable for families. Key points of interest include Mission Bay Park, Pacific Beach, and stunning views of the bay, making it an ideal destination for those seeking both relaxation and adventure.

  • Mission Beach: This vibrant beach offers a laid-back atmosphere with golden sands and lively boardwalks. Enjoy sunbathing, beach volleyball, or a stroll along the shoreline while soaking in the coastal vibes.
  • Hotel Circle: A bustling street lined with numerous hotels, restaurants, and shops, Hotel Circle captures the essence of city life. Its central location makes it an ideal base for exploring San Diego, with convenient access to various attractions.
  • USS Midway Museum: Step aboard this historic aircraft carrier to explore maritime history and naval aviation. The museum features interactive exhibits and restored aircraft, providing a unique insight into life at sea.

The nearest major airports for your trip to Mission Bay

Reaching Mission Bay in SAN Diego is convenient via San Diego International Airport (SAN), situated 6km away. Noteworthy hotels nearby include the 5-star Pendry San Diego, located 5km from the airport, and The US Grant, a Luxury Collection Hotel, just 3km away. Both hotels offer easy access to the airport. For those considering further options, Orange County’s John Wayne Airport (SNA) is 116km away, with excellent accommodations like The Resort at Pelican Hill and Balboa Bay Resort within a short drive. Alternatively, Ontario International Airport (ONT) is 146km from Mission Bay, featuring hotels like DoubleTree by Hilton Ontario Airport, which is merely 2km from the airport.

Frequently asked questions

What's the area like around Mission Bay?
Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, take a look at the 46 hotels and other accommodation options you'll find within a mile.
What's the best place to stay near Mission Bay?
San Diego Mission Bay Resort is one of the top choices for your stay based on our traveller data, and this resort offers a full-service spa and 2 restaurants. It's located just a short 0.9 mi (1.5 km) from Mission Bay. Another good option is Paradise Point Resort & Spa, located just 0.8 mi (1.3 km) away.
How many hotels will I find near Mission Bay?
Expedia has 46 hotels and other accommodation options within a mile from Mission Bay.
If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?
Yes! You'll find that most room reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of booking. Enter your dates, click on "Search", then you can filter by "fully refundable" to view the best deals near Mission Bay.
What can I see and do near Mission Bay?
Study the collections at Whaley House Museum, Maritime Museum of San Diego or Junipero Serra Museum. Mason Street School, Casa de Machado y Stewart and McCoy Museum House are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, San Diego Black Ensemble Theater and Cygnet Theater Company.