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Check prices for these dates

Next weekend
29 May - 31 May
In two weeks
5 Jun - 7 Jun

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Our top choices for Mission Bay hotels

Exterior

Boardwalk Hotel: Bikes, Boards & Beach Gear Included

Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (369 reviews)
"Great place to stay for a couple and a family, lots of food and shops near by and would definitely stay again, coming back soon!"
United States
John
The price is ฿5,581
฿6,292 total
includes taxes & fees
26 May - 27 May
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
Living area

ITH Mission Beach Backpacker Hostel

ITH Mission Beach Backpacker Hostel
2.0 star property
Central Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (214 reviews)
"Staff was great, all areas of the property were clean and I felt safe"
United States
Jessi
The price is ฿3,775
฿4,257 total
includes taxes & fees
27 May - 28 May
ITH Mission Beach Backpacker Hostel
5 outdoor pools, a heated pool, pool umbrellas, pool loungers

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay, 1.3 km from Mission Bay
8.8 out of 10, Excellent, (2,608 reviews)
"Phenomenal stay!! "
United States
Raymond
The price is ฿6,609
฿9,326 total
includes taxes & fees
31 May - 1 Jun
Paradise Point Resort & Spa
2 outdoor pools, a heated pool, pool loungers

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay, 1.6 km from Mission Bay
9.0 out of 10, Wonderful, (4,372 reviews)
"NICE PLACE TO STAY"
United States
René
The price is ฿6,175
฿8,037 total
includes taxes & fees
27 May - 28 May
The Dana on Mission Bay
Outdoor pool, a heated pool

The Wayfarer San Diego

The Wayfarer San Diego
4.0 star property
Mission Beach, 3 km from Mission Bay
9.4 out of 10, Exceptional, (1,782 reviews)
"Beautiful property and great location."
United States
Michael
The price is ฿9,115
฿10,477 total
includes taxes & fees
2 Jun - 3 Jun
The Wayfarer San Diego
Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay, 1.5 km from Mission Bay
8.6 out of 10, Excellent, (1,445 reviews)
"Great resort!"
United States
Jean-Michelle
The price is ฿5,985
฿8,608 total
includes taxes & fees
27 May - 28 May
San Diego Mission Bay Resort
In-room safe, desk, laptop workspace, blackout curtains

Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.5 km from Mission Bay
9.0 out of 10, Wonderful, (1,003 reviews)
"amazing breakfast and a great variety with an amazing morning staff"
United States
alyssa
The price is ฿4,966
฿5,708 total
includes taxes & fees
31 May - 1 Jun
Holiday Inn Express San Diego - SeaWorld Area by IHG
Breakfast, lunch and dinner served

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2 km from Mission Bay
8.8 out of 10, Excellent, (2,089 reviews)
"Great for families, bay view was incredible! "
United States
Anniesse
The price is ฿6,145
฿8,879 total
includes taxes & fees
26 May - 27 May
Bahia Resort Hotel
Studio Suite, 1 King Bed, Courtyard View | View from room

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
3.0 star property
3.2 km from Mission Bay
9.2 out of 10, Wonderful, (977 reviews)
"Staff was amazing and loved the place"
United States
Angela
The price is ฿4,779
฿5,493 total
includes taxes & fees
31 May - 1 Jun
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
Free continental breakfast

Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Fairfield Inn & Suites by Marriott San Diego Pacific Beach
3.0 star property
Pacific Beach, 2.9 km from Mission Bay
8.8 out of 10, Excellent, (891 reviews)
"Great service from start to finish and very clean hotel "
United States
Jesus
The price is ฿3,986
฿4,582 total
includes taxes & fees
31 May - 1 Jun
Fairfield Inn & Suites by Marriott San Diego Pacific Beach
3 outdoor pools, pool cabanas (surcharge), pool umbrellas

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay, 1.9 km from Mission Bay
8.4 out of 10, Very good, (1,622 reviews)
"The only place I will stay at in San diego! Clean hotel, great amenities, wonderful staff."
United States
Hanna
The price is ฿5,946
฿8,563 total
includes taxes & fees
28 May - 29 May
Hyatt Regency Mission Bay Spa and Marina
Lobby

Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
3.2 km from Mission Bay
8.6 out of 10, Excellent, (3,701 reviews)
"Room is clean, staff are especially helpful and courteous, breakfast was great…all in all made my stay comfortable and convenient because just minutes away from the airport…would stay here again"
United States
Parley Vinn Anastacius
The price is ฿3,724
฿4,281 total
includes taxes & fees
27 May - 28 May
Comfort Inn Sea World Area
Lobby

Best Western San Diego Pacific Beach/Mission Bay

Best Western San Diego Pacific Beach/Mission Bay
2.5 star property
Bay Park, 2.5 km from Mission Bay
8.2 out of 10, Very good, (397 reviews)
"The rooms were great, i love the bed and the pillows, parking was easy and so was checkin"
United States
Bernadette
The price is ฿2,703
฿3,106 total
includes taxes & fees
31 May - 1 Jun
Best Western San Diego Pacific Beach/Mission Bay
Property entrance

Catamaran Resort and Spa

Catamaran Resort and Spa
4.0 star property
Mission Beach, 2.9 km from Mission Bay
8.6 out of 10, Excellent, (1,257 reviews)
"Beautiful hotel grounds"
United States
Stephanie
The price is ฿6,621
฿9,352 total
includes taxes & fees
26 May - 27 May
Catamaran Resort and Spa
Lobby sitting area

GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,130 reviews)
"Great experience, will stay here again"
United States
Victoria
The price is ฿3,414
฿3,924 total
includes taxes & fees
31 May - 1 Jun
GreenTree Inn San Diego Mission Bay
Fishing

Surfer Beach Hotel

Surfer Beach Hotel
3.0 star property
Pacific Beach, 3 km from Mission Bay
8.2 out of 10, Very good, (1,287 reviews)
"Staff was helpful! Love staying here !"
United States
Jonathan
The price is ฿7,028
฿7,938 total
includes taxes & fees
2 Jun - 3 Jun
Surfer Beach Hotel
Desk, laptop workspace, blackout curtains, iron/ironing board

SureStay Hotel by Best Western San Diego Pacific Beach

SureStay Hotel by Best Western San Diego Pacific Beach
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (1,562 reviews)
"Nice room clean good breakfast"
United States
Michael
The price is ฿3,163
฿3,572 total
includes taxes & fees
31 May - 1 Jun
SureStay Hotel by Best Western San Diego Pacific Beach
Sun deck

ITH Beach Bungalow Surf Hostel

ITH Beach Bungalow Surf Hostel
2.0 star property
Pacific Beach, 3.2 km from Mission Bay
8.0 out of 10, Very good, (261 reviews)
"Great location. "
United States
Xihao
The price is ฿2,026
฿2,284 total
includes taxes & fees
3 Jun - 4 Jun
ITH Beach Bungalow Surf Hostel
Outdoor pool

Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.5 km from Mission Bay
7.4 out of 10, Good, (1,468 reviews)
"I really like the hotel Was close to sea world and lots of eating places with in walking distance."
United States
Latrice
The price is ฿2,308
฿2,653 total
includes taxes & fees
26 May - 27 May
Heritage Inn San Diego
Lobby

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.8 km from Mission Bay
7.4 out of 10, Good, (4,236 reviews)
"Nice stay, clean room"
United States
Luis
The price is ฿3,073
฿3,532 total
includes taxes & fees
31 May - 1 Jun
Wyndham Garden San Diego Near SeaWorld
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Compare popular hotels close to Mission Bay

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
Exterior
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
9.4
Exceptional
369 reviews
View
Living area
ITH Mission Beach Backpacker Hostel
2.0 star property
9.4
Exceptional
214 reviews
View
5 outdoor pools, a heated pool, pool umbrellas, pool loungers
Paradise Point Resort & Spa
4.0 star property
8.8
Excellent
2,608 reviews
View
2 outdoor pools, a heated pool, pool loungers
The Dana on Mission Bay
3.5 star property
9.0
Wonderful
4,372 reviews
View
Outdoor pool, a heated pool
The Wayfarer San Diego
4.0 star property
9.4
Exceptional
1,782 reviews
View

Top Mission Bay Hotel Reviews

Paradise Point Resort & Spa

Paradise Point Resort & Spa

2/10 Terrible
"Be aware, this hotel has become the shadow of itself. Go to the market and find 7/11 sugary candies and ice cream, very poor taste and quality bathing suits and accessories. Nothing like it used to be. We had two rooms and had asked to be sided. we ended up being far away from each other. Our room was next to a group of Russian speaking people who regrouped at the head quarter bedroom next to us. It was a zoo!. They brought tables and chairs and skewers and BBQ, smoked cigarettes, talked loud, played games. They were at least 20 folks. No one from the resort did anything to it. We literally could not go outside of out room, nor have our door open! many other rooms got affected by this group. They just squatted the place. We had come to rest and assumed it would be quiet and pleasant...The pickleball courts are poorly marked and located in a construction zone. The Coffee shop Tidal serves $7 latte from a machine you find in fast food place. Just blunt cheap and poor quality all around. Last, the gardens who used to be magnificents are all contaminated by blowers and certainly folks who never were taught how to care for plants. Oh, and if you ask the front desk who to speak to for complaint, there is no such thing. This place may have a nice location, but their years of glory are far far behind. We won't set foot there again."
Vincent 2-night trip
Posted 1 hour ago
Paradise Point Resort & Spa

Hotels near other Mission Bay attractions

Mission Bay Park

4.5/5 (168 reviews)
Mission Bay Park is just one of the places to see in San Diego, so why not enjoy the other things to explore during your travels? Discover the beautiful sunsets in this walkable area or enjoy its surfing spots.
See properties

Frequently asked questions

What's the area like around Mission Bay?
Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, take a look at the 44 hotels and other accommodation options you'll find within a mile.
What's the best place to stay near Mission Bay?
Paradise Point Resort & Spa is one of the top choices for your stay based on our traveller data, and this resort offers a marina and 5 outdoor pools. It's located just a short 0.8 mi (1.3 km) from Mission Bay. Another good option is San Diego Mission Bay Resort, located just 0.9 mi (1.5 km) away.
How many hotels will I find near Mission Bay?
Expedia has 44 hotels and other accommodation options within a mile from Mission Bay.
If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?
Yes! You'll find that most room reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of booking. Enter your dates, click on "Search", then you can filter by "fully refundable" to view the best deals near Mission Bay.
What can I see and do near Mission Bay?
Study the collections at Maritime Museum of San Diego, Whaley House Museum or Junipero Serra Museum. Casa de Machado y Stewart, McCoy Museum House and Casa de Estudillo are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, San Diego Black Ensemble Theater and Cygnet Theater Company.