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Check prices for these dates

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20 Mar - 21 Mar
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21 Mar - 22 Mar
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20 Mar - 22 Mar
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27 Mar - 29 Mar

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Our top choices for Mission Bay hotels

Living area

ITH Mission Beach Backpacker Hostel

ITH Mission Beach Backpacker Hostel
2.0 star property
Central Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (207 reviews)
"Staff was super friendly and very welcoming!! "
United States
Natalie
ITH Mission Beach Backpacker Hostel
2 outdoor pools, a heated pool, pool loungers

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay, 1.6 km from Mission Bay
9.0 out of 10, Wonderful, (4,171 reviews)
"Great location and friendly staff "
United States
jim
The price is ฿5,974
฿7,614 total
includes taxes & fees
5 Apr - 6 Apr
The Dana on Mission Bay
Exterior

Boardwalk Hotel: Bikes, Boards & Beach Gear Included

Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (319 reviews)
"Excellent location, great and helpful staff and super cute room! We'd stay here again for sure!"
United States
Charissa
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
5 outdoor pools, a heated pool, pool umbrellas, pool loungers

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay, 1.3 km from Mission Bay
8.8 out of 10, Excellent, (2,459 reviews)
"Great family place to stay. "
United States
Vera
The price is ฿7,372
฿10,192 total
includes taxes & fees
5 Apr - 6 Apr
Paradise Point Resort & Spa
View from property

The Wayfarer San Diego

The Wayfarer San Diego
4.0 star property
Mission Beach, 3 km from Mission Bay
9.4 out of 10, Exceptional, (1,749 reviews)
"Great location"
China
Yue
The price is ฿7,926
฿9,111 total
includes taxes & fees
15 Apr - 16 Apr
The Wayfarer San Diego
Reception

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
3.0 star property
3.2 km from Mission Bay
9.2 out of 10, Wonderful, (738 reviews)
"Breakfast area was very nice"
United States
Heidi
The price is ฿5,048
฿5,803 total
includes taxes & fees
29 Mar - 30 Mar
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
Free continental breakfast

Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Fairfield Inn & Suites by Marriott San Diego Pacific Beach
3.0 star property
Pacific Beach, 2.9 km from Mission Bay
9.0 out of 10, Wonderful, (867 reviews)
"Great place, great location, very comfortable!"
United States
Javier
The price is ฿4,221
฿4,852 total
includes taxes & fees
5 Apr - 6 Apr
Fairfield Inn & Suites by Marriott San Diego Pacific Beach
Exterior

Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.5 km from Mission Bay
8.8 out of 10, Excellent, (1,001 reviews)
"My friend and I enjoyed our stay. The beds were very comfy and the room was nice and clean. Also I have to say the breakfast was really good! "
United States
Brooke
The price is ฿5,520
฿6,345 total
includes taxes & fees
12 Apr - 13 Apr
Holiday Inn Express San Diego - SeaWorld Area by IHG
Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay, 1.5 km from Mission Bay
8.4 out of 10, Very good, (1,377 reviews)
"Nice place and conveniently close to attractions and good restaurants."
United States
Joel
The price is ฿7,760
฿10,637 total
includes taxes & fees
5 Apr - 6 Apr
San Diego Mission Bay Resort
Breakfast, lunch, dinner served; Mediterranean cuisine

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2 km from Mission Bay
8.6 out of 10, Excellent, (1,921 reviews)
"The resort was great. "
United States
Clifford
The price is ฿6,987
฿9,834 total
includes taxes & fees
19 Apr - 20 Apr
Bahia Resort Hotel
3 outdoor pools, pool cabanas (surcharge), pool umbrellas

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay, 1.9 km from Mission Bay
8.4 out of 10, Very good, (1,613 reviews)
"clean rooms, beds were comfortable, pools were good, breakfast place was very nice."
United States
sandeep
The price is ฿6,303
฿8,981 total
includes taxes & fees
5 Apr - 6 Apr
Hyatt Regency Mission Bay Spa and Marina
Lobby

Best Western San Diego Pacific Beach/Mission Bay

Best Western San Diego Pacific Beach/Mission Bay
2.5 star property
Bay Park, 2.5 km from Mission Bay
8.4 out of 10, Very good, (308 reviews)
"Nice staff and good breakfast."
United States
Carol
The price is ฿3,181
฿3,657 total
includes taxes & fees
5 Apr - 6 Apr
Best Western San Diego Pacific Beach/Mission Bay
Lobby

Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
3.2 km from Mission Bay
8.6 out of 10, Excellent, (3,495 reviews)
"It was very clean and comfortable would stay again "
United States
Amparo
The price is ฿3,312
฿3,807 total
includes taxes & fees
12 Apr - 13 Apr
Comfort Inn Sea World Area
Property entrance

Catamaran Resort and Spa

Catamaran Resort and Spa
4.0 star property
Mission Beach, 2.9 km from Mission Bay
8.6 out of 10, Excellent, (1,192 reviews)
"Location was nice and the beach being right there was great!"
United States
Brenda
The price is ฿7,767
฿10,656 total
includes taxes & fees
19 Apr - 20 Apr
Catamaran Resort and Spa
Lobby sitting area

GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (1,974 reviews)
"Great stay"
United States
Lizeth
The price is ฿3,393
฿3,900 total
includes taxes & fees
24 Mar - 25 Mar
GreenTree Inn San Diego Mission Bay
Fishing

Surfer Beach Hotel

Surfer Beach Hotel
3.0 star property
Pacific Beach, 3 km from Mission Bay
8.2 out of 10, Very good, (1,227 reviews)
"Clean room, very kind staff, beautiful view! "
United States
Michelle
The price is ฿6,754
฿7,628 total
includes taxes & fees
14 Apr - 15 Apr
Surfer Beach Hotel
Desk, laptop workspace, blackout curtains, iron/ironing board

SureStay Hotel by Best Western San Diego Pacific Beach

SureStay Hotel by Best Western San Diego Pacific Beach
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (1,557 reviews)
"Staff was outstanding,Nice rooms"
United States
Cimothy
The price is ฿3,572
฿4,034 total
includes taxes & fees
29 Mar - 30 Mar
SureStay Hotel by Best Western San Diego Pacific Beach
Sun deck

ITH Beach Bungalow Surf Hostel

ITH Beach Bungalow Surf Hostel
2.0 star property
Pacific Beach, 3.2 km from Mission Bay
8.0 out of 10, Very good, (257 reviews)
"Great location. "
United States
Xihao
The price is ฿5,400
฿6,089 total
includes taxes & fees
13 Apr - 14 Apr
ITH Beach Bungalow Surf Hostel
Outdoor pool

Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.5 km from Mission Bay
7.4 out of 10, Good, (1,327 reviews)
"We had a great stay at heritage inn, room was clean and tidy and location was great for our stay. "
Canada
calvin
The price is ฿2,049
฿2,355 total
includes taxes & fees
26 Mar - 27 Mar
Heritage Inn San Diego
Lobby sitting area

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.8 km from Mission Bay
7.4 out of 10, Good, (4,170 reviews)
"The room was spotless and the staff were very helpful and welcoming would definitely stay here again "
United States
Raul
The price is ฿3,477
฿3,997 total
includes taxes & fees
30 Mar - 31 Mar
Wyndham Garden San Diego Near SeaWorld
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Compare popular hotels close to Mission Bay

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
Living area
ITH Mission Beach Backpacker Hostel
2.0 star property
9.4
Exceptional
207 reviews
View
2 outdoor pools, a heated pool, pool loungers
The Dana on Mission Bay
3.5 star property
9.0
Wonderful
4,171 reviews
View
Exterior
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
9.4
Exceptional
319 reviews
View
5 outdoor pools, a heated pool, pool umbrellas, pool loungers
Paradise Point Resort & Spa
4.0 star property
8.8
Excellent
2,459 reviews
View
View from property
The Wayfarer San Diego
4.0 star property
9.4
Exceptional
1,749 reviews
View

Top Mission Bay Hotel Reviews

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

6/10 Okay
"Basic breakfast. The rooms are definitely over priced and the pool is a joke."
Willie 2-night trip
Posted 10 hours ago
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hotels near other Mission Bay attractions

Mission Bay Park

4.4/5 (165 reviews)
Mission Bay Park is just one of the places to see in San Diego, so why not enjoy the other things to explore during your travels? Discover the beautiful sunsets in this walkable area or enjoy its surfing spots.
See properties

Ski Beach

Why not spend a lazy afternoon at Ski Beach during your trip to San Diego?
See properties

Frequently asked questions

What's the area like around Mission Bay?
Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, take a look at the 49 hotels and other accommodation options you'll find within a mile.
What's the best place to stay near Mission Bay?
Paradise Point Resort & Spa is one of the top choices for your stay based on our traveller data, and this resort offers a marina and 5 outdoor pools. It's located just a short 0.8 mi (1.3 km) from Mission Bay. Another good option is San Diego Mission Bay Resort, located just 0.9 mi (1.5 km) away.
How many hotels will I find near Mission Bay?
Expedia has 49 hotels and other accommodation options within a mile from Mission Bay.
If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?
Yes! You'll find that most room reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of booking. Enter your dates, click on "Search", then you can filter by "fully refundable" to view the best deals near Mission Bay.
What can I see and do near Mission Bay?
Study the collections at Maritime Museum of San Diego, McCoy Museum House or Whaley House Museum. Casa de Machado y Stewart, Casa de Estudillo and Mason Street School are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, Cygnet Theater Company and Red Spade Theater.