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Top Trending Hotels Near Mission Bay

Living area
ITH Mission Beach Backpacker Hostel

ITH Mission Beach Backpacker Hostel

2.0 star property
Central Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (201)
"great location and free parking available across the street. "
United States
Saquib
ITH Mission Beach Backpacker Hostel
Luxury Suite, 2 Bedrooms, Patio, Ocean View | Individually decorated, individually furnished, free WiFi, bed sheets
Boardwalk Hotel: Bikes, Boards & Beach Gear Included

Boardwalk Hotel: Bikes, Boards & Beach Gear Included

3.0 star property
Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (261)
"The hotel is in a great location, between the bay and ocean. We especially enjoyed the access to the bikes and beach chairs! "
United States
Laura
The price is ฿4,041
฿4,556 total
includes taxes & fees
8 Dec - 9 Dec
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
2 outdoor pools, a heated pool, pool loungers
The Dana on Mission Bay

The Dana on Mission Bay

3.5 star property
Mission Bay, 1.7 km from Mission Bay
9.0 out of 10, Wonderful, (3903)
"Staff was great, room was spotless, and map was easy to follow."
United States
Rosa
The price is ฿4,755
฿6,103 total
includes taxes & fees
4 Jan - 5 Jan 2026
The Dana on Mission Bay
Outdoor pool, a heated pool
The Wayfarer San Diego

The Wayfarer San Diego

4.0 star property
Mission Beach, 3 km from Mission Bay
9.4 out of 10, Exceptional, (1707)
"Nice rooms, great location!! Staff was very friendly "
United States
Kevin M
The price is ฿5,959
฿6,850 total
includes taxes & fees
16 Dec - 17 Dec
The Wayfarer San Diego
Property grounds
Paradise Point Resort & Spa

Paradise Point Resort & Spa

4.0 star property
Mission Bay, 1.2 km from Mission Bay
8.6 out of 10, Excellent, (2347)
"Amazing place!"
United States
Barak Ben
The price is ฿4,128
฿6,433 total
includes taxes & fees
8 Dec - 9 Dec
Paradise Point Resort & Spa
Reception
Hampton Inn & Suites by Hilton San Diego SeaWorld

Hampton Inn & Suites by Hilton San Diego SeaWorld

3.0 star property
3.2 km from Mission Bay
9.2 out of 10, Wonderful, (386)
"The room was clean and the staff was very friendly."
United States
Li Li
The price is ฿3,869
฿4,447 total
includes taxes & fees
7 Jan - 8 Jan 2026
Hampton Inn & Suites by Hilton San Diego SeaWorld
Lobby
Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Fairfield Inn & Suites by Marriott San Diego Pacific Beach

2.5 star property
Pacific Beach, 2.9 km from Mission Bay
9.0 out of 10, Wonderful, (793)
"good place to stay"
United States
Sisi
The price is ฿3,159
฿3,631 total
includes taxes & fees
18 Dec - 19 Dec
Fairfield Inn & Suites by Marriott San Diego Pacific Beach
Suite, Multiple Beds | In-room safe, desk, laptop workspace, blackout curtains
Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG

2.5 star property
2.5 km from Mission Bay
8.8 out of 10, Excellent, (1004)
"The beds were very comfortable and everything was spotless. Breakfast was very good. "
United States
Raquel
The price is ฿3,893
฿4,475 total
includes taxes & fees
14 Dec - 15 Dec
Holiday Inn Express San Diego - SeaWorld Area by IHG
In-room safe, desk, blackout curtains, iron/ironing board
Bahia Resort Hotel

Bahia Resort Hotel

3.5 star property
Central Mission Beach, 2 km from Mission Bay
8.6 out of 10, Excellent, (1806)
"Staff was very friendly hotel was very very clean! "
United States
Antonio
The price is ฿4,059
฿6,442 total
includes taxes & fees
6 Jan - 7 Jan 2026
Bahia Resort Hotel
Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)
San Diego Mission Bay Resort

San Diego Mission Bay Resort

4.0 star property
Mission Bay, 1.6 km from Mission Bay
8.4 out of 10, Very good, (1308)
"great stay! Food was great and my kids loved the pool and location"
United States
ANDREA
The price is ฿5,712
฿8,004 total
includes taxes & fees
8 Dec - 9 Dec
San Diego Mission Bay Resort
Exterior
Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina

4.0 star property
Mission Bay, 1.9 km from Mission Bay
8.4 out of 10, Very good, (1567)
"Loved our stay "
United States
Jeremy
The price is ฿3,705
฿5,947 total
includes taxes & fees
16 Dec - 17 Dec
Hyatt Regency Mission Bay Spa and Marina
View from room
Catamaran Resort and Spa

Catamaran Resort and Spa

4.0 star property
Mission Beach, 2.9 km from Mission Bay
8.6 out of 10, Excellent, (1104)
"Amazing room, phenomenal staff, highly recommend! Favorite hotel in San Diego "
United States
Daniel
The price is ฿4,570
฿6,957 total
includes taxes & fees
6 Jan - 7 Jan 2026
Catamaran Resort and Spa
Standard Room, 2 Queen Beds, Non Smoking | In-room safe, desk, laptop workspace, blackout curtains
Comfort Inn Sea World Area

Comfort Inn Sea World Area

3.5 star property
3.2 km from Mission Bay
8.6 out of 10, Excellent, (3112)
"we like the location, free parking and breakfast."
United States
yi
The price is ฿2,712
฿3,118 total
includes taxes & fees
16 Dec - 17 Dec
Comfort Inn Sea World Area
Outdoor pool
Best Western San Diego Pacific Beach/Mission Bay

Best Western San Diego Pacific Beach/Mission Bay

2.5 star property
2.5 km from Mission Bay
8.2 out of 10, Very good, (184)
"Great stay, the staff was very friendly! "
United States
frances
The price is ฿2,301
฿2,645 total
includes taxes & fees
14 Dec - 15 Dec
Best Western San Diego Pacific Beach/Mission Bay
Fishing
Surfer Beach Hotel

Surfer Beach Hotel

3.0 star property
Pacific Beach, 3 km from Mission Bay
8.2 out of 10, Very good, (1177)
"Great staff, fantastic location."
Canada
Pawel
The price is ฿4,723
฿5,334 total
includes taxes & fees
14 Dec - 15 Dec
Surfer Beach Hotel
Standard Room, 2 Queen Beds | Pillow-top beds, individually decorated, individually furnished, desk
GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay

2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (1847)
"The breakfast was the best part and the people also will wonderful staff wonderful also"
United States
Tempest
The price is ฿2,688
฿3,090 total
includes taxes & fees
14 Dec - 15 Dec
GreenTree Inn San Diego Mission Bay
Desk, laptop workspace, blackout curtains, iron/ironing board
SureStay Hotel by Best Western San Diego Pacific Beach

SureStay Hotel by Best Western San Diego Pacific Beach

2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (1398)
"Perfect stay for a very good price. "
United States
Damon
The price is ฿2,527
฿2,854 total
includes taxes & fees
14 Dec - 15 Dec
SureStay Hotel by Best Western San Diego Pacific Beach
Sun deck
ITH Beach Bungalow Surf Hostel

ITH Beach Bungalow Surf Hostel

2.0 star property
Pacific Beach, 3.2 km from Mission Bay
8.0 out of 10, Very good, (254)
"Everyone was so cool and welcoming"
United States
noah
The price is ฿2,378
฿2,681 total
includes taxes & fees
18 Dec - 19 Dec
ITH Beach Bungalow Surf Hostel
Lobby
Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld

3.0 star property
2.8 km from Mission Bay
7.4 out of 10, Good, (4098)
"Clean rooms and friendly staff."
United States
Aniket
The price is ฿2,698
฿3,101 total
includes taxes & fees
14 Dec - 15 Dec
Wyndham Garden San Diego Near SeaWorld
Front of property
Heritage Inn San Diego

Heritage Inn San Diego

2.0 star property
2.5 km from Mission Bay
7.2 out of 10, Good, (1150)
"Clean room, great location "
United States
Benjamin
The price is ฿1,966
฿2,260 total
includes taxes & fees
8 Dec - 9 Dec
Heritage Inn San Diego
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Top Mission Bay Hotel Reviews

Comfort Inn Sea World Area

Comfort Inn Sea World Area

10/10 Excellent
"we like the location, free parking and breakfast."
yi 3-night trip
Posted 3 days ago
Comfort Inn Sea World Area

Hotels near other Mission Bay attractions

Mission Bay Park

4.4/5 (165 reviews)
Mission Bay Park is just one of the places to see in San Diego, so why not enjoy the other things to explore during your travels? Discover the beautiful sunsets in this walkable area or enjoy its surfing spots.
See properties

Ski Beach

Why not spend a lazy afternoon at Ski Beach during your trip to San Diego?
See properties

Frequently asked questions

What's the area like around Mission Bay?
Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, take a look at the 45 hotels and other accommodation options you'll find within a mile.
What's the best place to stay near Mission Bay?
Paradise Point Resort & Spa is one of the top choices for your stay based on our traveller data, and this resort offers a marina and 5 outdoor pools. It's located just a short 0.7 mi (1.2 km) from Mission Bay. Another good option is San Diego Mission Bay Resort, located just 1 mi (1.6 km) away.
How many hotels will I find near Mission Bay?
Expedia has 45 hotels and other accommodation options within a mile from Mission Bay.
If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?
Yes! You'll find that most room reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of booking. Enter your dates, click on "Search", then you can filter by "fully refundable" to view the best deals near Mission Bay.
What can I see and do near Mission Bay?
Study the collections at Maritime Museum of San Diego, Whaley House Museum or Junipero Serra Museum. Casa de Machado y Stewart, McCoy Museum House and Casa de Estudillo are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, Cygnet Theater Company and Red Spade Theater.

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