A large body of water surrounded by dense forests and a winding road.

Find hotels in Henderson Harbor, NY from ฿2,251

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Check prices for these dates

This weekend
24 Jul - 26 Jul
Next weekend
31 Jul - 2 Aug

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Star rating

Our top choices for Henderson Harbor hotels

Exterior

1. The GillHouse

The GillHouse
2.0 star property
Henderson Harbor
9.8 out of 10, Exceptional, (18 reviews)
"Very accommodating restaurant staff was super friendly"
United States
Tracey
The price is ฿5,938
฿6,591 total
includes taxes & fees
26 Jul - 27 Jul
The GillHouse
Premium Room, 1 Queen Bed with Sofa bed | Free WiFi

2. Harbor House Inn

Harbor House Inn
2.5 star property
Sackets Harbor
9.2 out of 10, Wonderful, (306 reviews)
"Very nice hotel in a great location. Staff was very helpful and attentive. Can’t wait to return when the third floor renovation is complete. The town is small but beautiful and has a rich history."
United States
Greg
The price is ฿8,194
฿9,550 total
includes taxes & fees
16 Aug - 17 Aug
Harbor House Inn
Exterior

3. Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG

Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG
2.5 star property
Watertown
9.2 out of 10, Wonderful, (1,003 reviews)
"Clean room pleasant staff"
United States
Bharath Kumar
The price is ฿3,979
฿4,416 total
includes taxes & fees
9 Aug - 10 Aug
Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG
Lobby lounge

4. Fairfield Inn & Suites Watertown Thousand Islands

Fairfield Inn & Suites Watertown Thousand Islands
3.0 star property
Watertown
9.2 out of 10, Wonderful, (745 reviews)
"Good place to stay."
United States
Cliff
The price is ฿4,487
฿4,980 total
includes taxes & fees
23 Aug - 24 Aug
Fairfield Inn & Suites Watertown Thousand Islands
Desk, iron/ironing board, free cots/infant beds, free WiFi

5. Comfort Inn & Suites Watertown - 1000 Islands

Comfort Inn & Suites Watertown - 1000 Islands
2.5 star property
Watertown
8.6 out of 10, Excellent, (1,014 reviews)
"We had a great stay, the staff were helpful and polite."
United States
Adora
The price is ฿3,825
฿4,246 total
includes taxes & fees
23 Aug - 24 Aug
Comfort Inn & Suites Watertown - 1000 Islands
Reception

6. Hampton Inn Watertown

Hampton Inn Watertown
2.5 star property
Watertown
9.0 out of 10, Wonderful, (1,000 reviews)
"Staff was friendly, breakfast was great, everything was clean. Will definitely stay there again when we stay in Watertown to travel up north."
United States
Sarah
The price is ฿3,886
฿4,314 total
includes taxes & fees
23 Aug - 24 Aug
Hampton Inn Watertown
Exterior

7. Hilton Garden Inn Watertown/Thousand Islands

Hilton Garden Inn Watertown/Thousand Islands
3.0 star property
Watertown
9.2 out of 10, Wonderful, (1,003 reviews)
"Nice place to stay. Friendly staff."
Canada
Al
The price is ฿5,199
฿5,771 total
includes taxes & fees
23 Aug - 24 Aug
Hilton Garden Inn Watertown/Thousand Islands
Exterior

8. Ramada by Wyndham Watertown/Thousand Islands NY

Ramada by Wyndham Watertown/Thousand Islands NY
2.5 star property
Watertown
8.0 out of 10, Very good, (1,089 reviews)
"Again great for a few nights- the pool and the breakfast are wonderful. I would stay again"
United States
Stephany
The price is ฿2,791
฿3,098 total
includes taxes & fees
9 Aug - 10 Aug
Ramada by Wyndham Watertown/Thousand Islands NY
Lobby

9. Spark by Hilton Watertown

Spark by Hilton Watertown
2.5 star property
Watertown
7.6 out of 10, Good, (17 reviews)
"the room was clean and the staff was friendly."
United States
sheila
The price is ฿3,301
฿3,665 total
includes taxes & fees
10 Aug - 11 Aug
Spark by Hilton Watertown
Deluxe Studio Suite, Non Smoking | Desk, laptop workspace, blackout curtains, iron/ironing board

10. Travel Inn

Travel Inn
2.0 star property
Watertown
6.8 out of 10, (44 reviews)
"Staff were extremely friendly and helpful."
United States
Natalie
The price is ฿2,680
฿2,975 total
includes taxes & fees
26 Jul - 27 Jul
Travel Inn
Indoor pool, open 2:00 PM to 9:30 PM, pool loungers

11. Adirondack Efficiencies Watertown

Adirondack Efficiencies Watertown
2.0 star property
Watertown
6.8 out of 10, (592 reviews)
"I needed somewhere to stay for a week without breaking the bank. Adirondack Efficiency fit the bill. No sugar coating...you get what you pay for, but the room was clean and the room was soundproof."
United States
Leonard
The price is ฿2,571
฿2,854 total
includes taxes & fees
26 Jul - 27 Jul
Adirondack Efficiencies Watertown
Deluxe Single Room, 1 Queen Bed | Living area | TV

12. Nest Inn

Nest Inn
2.0 star property
Watertown
7.8 out of 10, Good, (90 reviews)
"It's a sweet, well taken care of place to stay."
United States
Debbie
The price is ฿2,281
฿2,720 total
includes taxes & fees
19 Aug - 20 Aug
Nest Inn
Studio Suite, 1 King Bed, Non Smoking | Desk, iron/ironing board, free WiFi, alarm clocks

13. Days Inn by Wyndham Watertown Fort Drum

Days Inn by Wyndham Watertown Fort Drum
2.0 star property
Calcium
8.8 out of 10, Excellent, (1,005 reviews)
"Clean room, comfortable beds, walking distance to food, great staff."
United States
Tanya
The price is ฿3,349
฿3,718 total
includes taxes & fees
23 Aug - 24 Aug
Days Inn by Wyndham Watertown Fort Drum
Room, 1 Queen Bed | Premium bedding, free WiFi, bed sheets

14. Allen's Budget Motel

Allen's Budget Motel
2.5 star property
Watertown
8.8 out of 10, Excellent, (257 reviews)
"Very clean motel. Quiet and spacious rooms. The sweet elderly woman at the desk upon check in was extremely helpful in suggesting a place to eat within 10 minutes which was absolutely delicious. Shower had A LOT of pressure. You definitely got clean using that!! If I ever find myself around Watertown again, I’ll definitely stay there again. Price is a bargain for what you get."
United States
Dennis
The price is ฿2,028
฿2,251 total
includes taxes & fees
14 Aug - 15 Aug
Allen's Budget Motel
Lobby

15. Quality Inn & Suites Watertown Fort Drum

Quality Inn & Suites Watertown Fort Drum
2.5 star property
Calcium
8.2 out of 10, Very good, (1,003 reviews)
"Very well maintained"
United States
John
The price is ฿3,055
฿3,392 total
includes taxes & fees
23 Aug - 24 Aug
Quality Inn & Suites Watertown Fort Drum
Property entrance

16. Royal Inn Motel

Royal Inn Motel
2.0 star property
Watertown
7.2 out of 10, Good, (433 reviews)
"Older place so could use some updates. But for the price was ok. Staff/owners were very helpful and friendly"
United States
Robin
The price is ฿2,368
฿2,629 total
includes taxes & fees
26 Jul - 27 Jul
Royal Inn Motel
Studio Suite, 2 Queen Beds | Premium bedding, desk, laptop workspace, blackout curtains

17. Candlewood Suites Watertown Fort Drum by IHG

Candlewood Suites Watertown Fort Drum by IHG
2.5 star property
Evans Mills
8.4 out of 10, Very good, (514 reviews)
"Clean room and great location "
United States
Terrence
The price is ฿4,466
฿4,957 total
includes taxes & fees
24 Aug - 25 Aug
Candlewood Suites Watertown Fort Drum by IHG
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Stay near popular Henderson Harbor attractions

Saiff Charters

Lake Ontario comes alive with Saiff Charters' expert-guided salmon and trout fishing excursions. Experienced captains ensure a productive day on fully equipped boats while you enjoy lodging and meals.
See properties

Learn more about Henderson Harbor

Venture to sights like Lake Ontario and Saiff Charters as you discover Henderson Harbor.

See all hotels in Henderson Harbor
A large body of water surrounded by dense forests and a winding road.

Top Henderson Harbor Hotel Reviews

Comfort Inn & Suites Watertown - 1000 Islands

Comfort Inn & Suites Watertown - 1000 Islands

10/10 Excellent
"Very nice!"
Amy 1-night trip
Posted 2 hours ago
Comfort Inn & Suites Watertown - 1000 Islands

More cheap stays in Henderson Harbor

Ramada by Wyndham Watertown/Thousand Islands NY

Ramada by Wyndham Watertown/Thousand Islands NY

21000 NY State Rt 3 Watertown NY
The price is ฿2,791 per night from 9 Aug to 10 Aug
฿2,791
฿3,098 total
9 Aug - 10 Aug
includes taxes & fees

Frequently asked questions

Where is the best place for a stay in Henderson Harbor?
Based on our traveller data, The GillHouse is one of the top choices for your stay. This hotel is a short 1-minute walk from Lake Ontario, and it offers a restaurant and free parking. Other good options for your stay in the area are Ramada by Wyndham Watertown/Thousand Islands NY and Quality Inn & Suites Watertown Fort Drum. See all available top hotels, or vacation rentals in Henderson Harbor.
If I need to cancel my hotel reservation in Henderson Harbor, will I receive a refund?
Yes! Most hotel bookings are refundable provided that you cancel before the hotel's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you have a non-refundable reservation, you might be able to cancel it and be given a refund within a 24-hour period of booking. Filter your search by fully refundable to find flexible hotel deals in Henderson Harbor.
What's the best dog-friendly accommodation option in Henderson Harbor?
The GillHouse is a top dog-friendly hotel, and offers a restaurant and a bar/lounge for its human guests. See more pet-friendly hotel accommodations in Henderson Harbor.
What are some accommodation options with pools in Henderson Harbor?
Ramada by Wyndham Watertown/Thousand Islands NY: Provides daily, a seasonal outdoor pool and free self parking. Comfort Inn & Suites Watertown - 1000 Islands and Adirondack Efficiencies Watertown are a couple of other choices that offer an on-site pool. View all hotels with pools in Henderson Harbor.
How is it to stay in Henderson Harbor?
Those travelling to Henderson Harbor will definitely enjoy the sights to see and things to do. In Henderson Harbor, there are 5 hotels and other accommodation options to choose from. Find out more about Henderson Harbor.
What should I see while I'm in Henderson Harbor?
A couple of favourite places to visit are Lake Ontario and Saiff Charters. You'll also find Westcott Beach State Park and Southwick Beach State Park in the area. Take a look at what more there is to see and do in Expedia's Henderson Harbor guide.
What's the seasonal weather in Henderson Harbor?
The hottest months are usually July and August, with an average temperature of 19°C, while the coldest months are January and February, with an average of -3°C. The snowiest months in Henderson Harbor are January, February, March and November, with each month seeing an average of 47 cm of snowfall.