Find hotels in Henderson Harbor, NY from ฿1,955

Start date: Check-in selected.
To Date
End date: Check-out

    Change your mind

    Book hotels with free cancellation

    Treat yourself

    Sign in to save 10% or more on thousands of hotels

    Be picky

    Search almost a million properties worldwide

Check prices for these dates

Filter by

Guest rating
Guest rating
Star rating

Top 10 Henderson Harbor hotels and places to stay

The GillHouse
2.0 star property
9.0 out of 10, Wonderful, (2)
"The Gillhouse recently was remodeled. The rooms have new carpet, bathroom tile, vanity, paint or wallpaper. The rooms had new HVAC systems, TVs, ceiling fans and new windows with the privacy shade built in. They room style is modern. The property is right on Henderson Bay with beautiful view of the bay from the back porches and restaurant. Since we stayed late or off season the Gillhouse was quiet. The owner, Steve, showed us to our room and how everything in the room worked. Steve was very...
The price is ฿3,486
฿3,870 total
includes taxes & fees
19 Oct - 20 Oct
The GillHouse
Comfort Inn & Suites Watertown - 1000 Islands
2.5 star property
8.6 out of 10, Excellent, (1012)
"Love this hotel"
The price is ฿2,876
฿3,192 total
includes taxes & fees
2 Nov - 3 Nov
Comfort Inn & Suites Watertown - 1000 Islands
Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG
2.5 star property
9.2 out of 10, Wonderful, (1009)
"Hotel was very clean, the breakfast was very good as well."
The price is ฿2,966
฿3,292 total
includes taxes & fees
31 Oct - 1 Nov
Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG
Ramada by Wyndham Watertown/Thousand Islands NY
2.5 star property
8.0 out of 10, Very good, (1061)
"Great location"
The price is ฿2,571
฿2,853 total
includes taxes & fees
29 Oct - 30 Oct
Ramada by Wyndham Watertown/Thousand Islands NY
Days Inn by Wyndham Watertown Fort Drum
2.0 star property
8.6 out of 10, Excellent, (1020)
"The room was very clean and comfy. Definitely was a good stay"
The price is ฿1,919
฿2,130 total
includes taxes & fees
2 Nov - 3 Nov
Days Inn by Wyndham Watertown Fort Drum
Best Western Watertown Fort Drum
2.5 star property
7.8 out of 10, Good, (1002)
"Nice hotel, plenty of parking and like 8 or 10 EV charging stations. "
The price is ฿2,489
฿2,763 total
includes taxes & fees
19 Oct - 20 Oct
Best Western Watertown Fort Drum
Hilton Garden Inn Watertown/Thousand Islands
3.0 star property
9.2 out of 10, Wonderful, (968)
"Very convenient Staff pleasant"
The price is ฿4,134
฿4,589 total
includes taxes & fees
24 Oct - 25 Oct
Hilton Garden Inn Watertown/Thousand Islands
Hampton Inn Watertown
2.5 star property
9.0 out of 10, Wonderful, (1010)
"Great stay "
The price is ฿3,173
฿3,522 total
includes taxes & fees
28 Oct - 29 Oct
Hampton Inn Watertown
Quality Inn & Suites Watertown Fort Drum
2.5 star property
8.2 out of 10, Very good, (1017)
"Love it there"
The price is ฿1,935
฿2,148 total
includes taxes & fees
29 Oct - 30 Oct
Quality Inn & Suites Watertown Fort Drum
Adirondack Efficiencies Watertown
2.0 star property
6.6 out of 10, (532)
"Great experience again! "
The price is ฿1,789
฿1,985 total
includes taxes & fees
18 Oct - 19 Oct
Adirondack Efficiencies Watertown
Fairfield Inn & Suites Watertown Thousand Islands
2.5 star property
9.2 out of 10, Wonderful, (700)
"Nice clean hotel with friendly staff"
The price is ฿4,032
฿4,476 total
includes taxes & fees
29 Oct - 30 Oct
Fairfield Inn & Suites Watertown Thousand Islands
Travel Inn
10.0 out of 10, Exceptional, (1)
The price is ฿2,019
฿2,241 total
includes taxes & fees
19 Oct - 20 Oct
Travel Inn
Royal Inn Motel
2.0 star property
7.2 out of 10, Good, (399)
"Clean and friendly good people "
The price is ฿1,761
฿1,955 total
includes taxes & fees
18 Oct - 19 Oct
Royal Inn Motel
Harbor House Inn
2.5 star property
9.2 out of 10, Wonderful, (297)
"Excellent hosts "
The price is ฿5,517
฿6,124 total
includes taxes & fees
19 Oct - 20 Oct
Harbor House Inn
Nest Inn
2.0 star property
7.8 out of 10, Good, (58)
"Nice place for the price"
The price is ฿1,815
฿2,195 total
includes taxes & fees
19 Oct - 20 Oct
Nest Inn
Candlewood Suites Watertown Fort Drum by IHG
2.5 star property
8.4 out of 10, Very good, (486)
"easy traveling to are destination"
The price is ฿3,058
฿3,394 total
includes taxes & fees
1 Nov - 2 Nov
Candlewood Suites Watertown Fort Drum by IHG
Allen's Budget Motel
2.5 star property
8.8 out of 10, Excellent, (244)
"Stay was very comfortable and the staff was excellent "
The price is ฿1,886
฿2,094 total
includes taxes & fees
19 Oct - 20 Oct
Allen's Budget Motel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Stay near popular Henderson Harbor attractions

Top Henderson Harbor Hotel Reviews

More cheap stays in Henderson Harbor

Frequently asked questions

Where is the best place for a stay in Henderson Harbor?
Based on Expedia's traveller preferences, Henderson Harbor Cottage w/ Lake Access! is a top place to stay in Henderson Harbor. Other good options for your stay in the area are Ramada by Wyndham Watertown/Thousand Islands NY and Comfort Inn & Suites Watertown - 1000 Islands. See all available top hotels, or vacation rentals in Henderson Harbor.
If I need to cancel my hotel reservation in Henderson Harbor, will I receive a refund?
Yes! Most hotel bookings are refundable provided that you cancel before the hotel's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you have a non-refundable reservation, you might be able to cancel it and be given a refund within a 24-hour period of booking. Filter your search by fully refundable to find flexible hotel deals in Henderson Harbor.
What's the best dog-friendly accommodation option in Henderson Harbor?
The GillHouse is a top dog-friendly hotel, and offers a restaurant and a bar/lounge for its human guests. See more pet-friendly hotel accommodations in Henderson Harbor.
What are some accommodation options with pools in Henderson Harbor?
Ramada by Wyndham Watertown/Thousand Islands NY: Provides daily, a seasonal outdoor pool and free self parking. Comfort Inn & Suites Watertown - 1000 Islands and Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG are a couple of other choices that offer an on-site pool. View all hotels with pools in Henderson Harbor.
How is it to stay in Henderson Harbor?
Those travelling to Henderson Harbor will definitely enjoy the sights to see and things to do. In Henderson Harbor, there are 5 hotels and other accommodation options to choose from. Find out more about Henderson Harbor.
What should I see while I'm in Henderson Harbor?
A couple of favourite places to visit are Lake Ontario and Saiff Charters. You'll also find Southwick Beach State Park and Sackets Harbor Battlefield State Park in the area. Take a look at what more there is to see and do in Expedia's Henderson Harbor guide.
What's the seasonal weather in Henderson Harbor?
The hottest months are usually July and August, with an average temperature of 19°C, while the coldest months are January and February, with an average of -3°C. The snowiest months in Henderson Harbor are January, February, March and November, with each month seeing an average of 47 cm of snowfall.