A beach with clear turquoise water, palm trees, and people enjoying the sand and sea.

Search Hotels in Marathon Shores, Marathon

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Next weekend
2 Oct - 4 Oct
In two weeks
9 Oct - 11 Oct

Filter by

Star rating

Guest rating

Selecting then applying a filter from this group will update the results on a new page

Our top choices for Marathon Shores hotels

A bar area with a long counter, bar stools, and a view of the water.

1. Fairfield Inn & Suites by Marriott Marathon Florida Keys

Fairfield Inn & Suites by Marriott Marathon Florida Keys
3.0 star property
1.9 km from Marathon Shores
9.2 out of 10, Wonderful, (1,219 reviews)
"Very good experience at this hotel! Will stay again!"
United States
JOSE
The price is ฿4,477
฿5,037 total
includes taxes & fees
4 Oct - 5 Oct
Fairfield Inn & Suites by Marriott Marathon Florida Keys
Three colorful drinks on a table with a thatched roof and outdoor seating.

2. Hampton Inn Marathon - Florida Keys

Hampton Inn Marathon - Florida Keys
2.5 star property
2.1 km from Marathon Shores
9.0 out of 10, Wonderful, (1,001 reviews)
"Great place to stay will definitely stay again"
United States
Linda
The price is ฿4,364
฿4,909 total
includes taxes & fees
8 Oct - 9 Oct
Hampton Inn Marathon - Florida Keys
A covered outdoor area with a view of a pool and palm trees.

3. Kingsail Resort

Kingsail Resort
2.0 star property
2.9 km from Marathon Shores
8.6 out of 10, Excellent, (1,122 reviews)
"Amazing staff and the pool was great The room was perfect for my trip through the keys"
United States
Jennifer
The price is ฿2,554
฿2,873 total
includes taxes & fees
5 Oct - 6 Oct
Kingsail Resort
A marina with a dock, a boat, and a row of buildings with large windows.

4. Coconut Cay Resort & Marina

Coconut Cay Resort & Marina
3.0 star property
2.8 km from Marathon Shores
8.6 out of 10, Excellent, (1,065 reviews)
"Amazing place to stay in Marathon, Big rooms, amazing porch view from room 201"
United States
Oscar
The price is ฿2,654
฿3,381 total
includes taxes & fees
5 Oct - 6 Oct
Coconut Cay Resort & Marina
A wooden dock leading to a row of boats, with a thatched-roof building and palm trees in the background.

5. Bonefish Bay Motel

Bonefish Bay Motel
2.5 star property
1.6 km from Marathon Shores
9.2 out of 10, Wonderful, (650 reviews)
"The room was clean, very large bathroom and closet. We liked the pool and pickleball court. Thank you for the amenities in the room. I would love to stay here again!"
United States
William
The price is ฿3,472
฿4,179 total
includes taxes & fees
27 Sept - 28 Sept
Bonefish Bay Motel
An aerial view of a resort with a central pool, multiple buildings, and a beach area with sun loungers.

6. Isla Bella Beach Resort & Spa

Isla Bella Beach Resort & Spa
5.0 star property
8.7 km from Marathon Shores
9.2 out of 10, Wonderful, (1,287 reviews)
"Great location and staff!! Resort was beautiful!!!"
United States
Andrew
The price is ฿6,160
฿8,903 total
includes taxes & fees
28 Sept - 29 Sept
Isla Bella Beach Resort & Spa
A hammock on a sandy beach with palm trees, a pool, and lounge chairs in the background.

7. Seascape Resort & Marina

Seascape Resort & Marina
3.0 star property
2.5 km from Marathon Shores
9.4 out of 10, Exceptional, (635 reviews)
"My stay was excellent! Room was cleaning, the whole place is kept in wonderful conditions and you have everything you need."
United States
Laura
The price is ฿3,950
฿6,138 total
includes taxes & fees
13 Oct - 14 Oct
Seascape Resort & Marina
A pool area with lounge chairs and umbrellas, a thatched-roof structure, and a view of the ocean.

8. Glunz Ocean Beach Hotel & Resort

Glunz Ocean Beach Hotel & Resort
3.0 star property
2.5 km from Marathon Shores
9.0 out of 10, Wonderful, (1,002 reviews)
"The Glunz Staff are pleasant and helpful, as they provided suggestions for dining options and adventure site seeing opportunities, as well as providing directional assistance to arrive at such locations."
United States
PAULA LINN
The price is ฿4,987
฿7,050 total
includes taxes & fees
27 Sept - 28 Sept
Glunz Ocean Beach Hotel & Resort
A small boat house named "SEACOVE" with a dock extending into calm water, surrounded by pebbles and rocks.

9. Floating Sea Cove Resort & Marina

Floating Sea Cove Resort & Marina
2.0 star property
2.4 km from Marathon Shores
5.4 out of 10, (999 reviews)
"I have stayed here many times great for place to stay"
United States
Matthew
The price is ฿1,569
฿2,289 total
includes taxes & fees
27 Sept - 28 Sept
Floating Sea Cove Resort & Marina
A building with a white exterior, purple doors, and a small patio area with chairs and a table.

10. Siesta Motel

Siesta Motel
2.0 star property
2.6 km from Marathon Shores
7.4 out of 10, Good, (783 reviews)
"The staff was very accommodating for a late night check in!"
Canada
Titus
The price is ฿1,991
฿2,239 total
includes taxes & fees
30 Sept - 1 Oct
Siesta Motel
Two hammocks on a sandy beach with a clear blue sky and turquoise water.

11. Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys

Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys
3.0 star property
7 km from Marathon Shores
9.0 out of 10, Wonderful, (1,002 reviews)
"Very nice place to stay."
United States
Teresa
The price is ฿4,514
฿6,247 total
includes taxes & fees
4 Oct - 5 Oct
Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys
Three Adirondack chairs on a sandy beach with a view of the ocean and a clear sky.

12. Banana Bay Resort & Marina

Banana Bay Resort & Marina
3.0 star property
5 km from Marathon Shores
7.4 out of 10, Good, (1,004 reviews)
"Staff was friendly and room was awesome."
United States
Alex
The price is ฿3,377
฿5,114 total
includes taxes & fees
28 Sept - 29 Sept
Banana Bay Resort & Marina
A marina with boats docked, a lighthouse, and a resort with outdoor seating.

13. Faro Blanco Resort Marathon Florida Keys, Curio by Hilton

Faro Blanco Resort Marathon Florida Keys, Curio by Hilton
4.0 star property
7.1 km from Marathon Shores
8.6 out of 10, Excellent, (1,159 reviews)
"Great resort, restaurant and bar!"
United States
Rick
The price is ฿4,901
฿6,769 total
includes taxes & fees
11 Oct - 12 Oct
Faro Blanco Resort Marathon Florida Keys, Curio by Hilton
A tropical resort with a swimming pool, palm trees, and a view of the ocean.

14. Gulf View Waterfront Resort

Gulf View Waterfront Resort
2.5 star property
9.9 km from Marathon Shores
8.4 out of 10, Very good, (623 reviews)
"Great spot, good price."
United States
Sonja L
The price is ฿3,133
฿3,524 total
includes taxes & fees
27 Sept - 28 Sept
Gulf View Waterfront Resort
A wooden deck with two chairs and a table, overlooking a beach with palm trees and the ocean.

15. Rainbow Bend Resort

Rainbow Bend Resort
2.5 star property
8.5 km from Marathon Shores
8.2 out of 10, Very good, (1,000 reviews)
"Great little place, beach front"
United Kingdom
Adam
The price is ฿3,457
฿5,392 total
includes taxes & fees
27 Sept - 28 Sept
Rainbow Bend Resort
A wooden deck with a pool and chairs overlooking a beach with palm trees.

16. Grassy Flats Resort & Beach Club

Grassy Flats Resort & Beach Club
4.0 star property
9.1 km from Marathon Shores
9.4 out of 10, Exceptional, (499 reviews)
"The room was really nice with the balcony and view! I"
United States
Tiffany
The price is ฿5,845
฿8,178 total
includes taxes & fees
25 Oct - 26 Oct
Grassy Flats Resort & Beach Club
A marina with several docked boats and a row of small, white cabins with blue roofs.

17. Yacht Haven Marina

Yacht Haven Marina
3.5 star property
4.3 km from Marathon Shores
9.6 out of 10, Exceptional, (362 reviews)
"Clean Friendly staff Recommend for family"
United States
Yamei
The price is ฿3,012
฿8,095 total
includes taxes & fees
28 Sept - 29 Sept
Yacht Haven Marina
A swimming pool surrounded by palm trees and lounge chairs.

18. Tranquility Bay Beachfront Hotel and Resort

Tranquility Bay Beachfront Hotel and Resort
4.0 star property
6.6 km from Marathon Shores
8.8 out of 10, Excellent, (1,003 reviews)
"Very good hotel and a lovely place to spend a few days"
United Kingdom
Stuart
The price is ฿6,117
฿9,016 total
includes taxes & fees
19 Oct - 20 Oct
Tranquility Bay Beachfront Hotel and Resort
A nighttime pool area with a clear view of the pool, surrounding palm trees, and a building with a sign.

19. Skipjack Resort & Marina

Skipjack Resort & Marina
3.0 star property
4.8 km from Marathon Shores
8.6 out of 10, Excellent, (1,290 reviews)
"Great spot"
Canada
Justin
The price is ฿4,778
฿6,727 total
includes taxes & fees
27 Sept - 28 Sept
Skipjack Resort & Marina
A beach with palm trees, a sandy path, and beach chairs.

20. Aqua Lodge Rentals At Coconut Cay

Aqua Lodge Rentals At Coconut Cay
3.5 star property
2.7 km from Marathon Shores
9.6 out of 10, Exceptional, (235 reviews)
"Never stayed in a houseboat before. It was a novel experience!"
United States
Susan
The price is ฿3,057
฿8,478 total
includes taxes & fees
27 Sept - 28 Sept
Aqua Lodge Rentals At Coconut Cay
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Where to stay in Marathon Shores

Find the best Marathon Shores areas for the activities you enjoy most.
An aerial view of a coastal area with a large bay, several islands, and a densely populated shoreline.

Little Venice

While there might not be top attractions in Little Venice, you can explore the larger area and discover places like Captain Hooks Marina and Dive Center and Sunset Park Beach.

A sailboat with white sails on a turquoise sea, a beach with palm trees, and a partly cloudy sky.

Coral Lagoon

Coral Lagoon might not have many top sights, but Captain Hooks Marina and Dive Center and Sunset Park Beach are two attractions nearby that you can check out.

An aerial view of a coastal town with a beach, clear turquoise waters, and a small island.

Farara Shores

Farara Shores might not have many top sights, but Marathon Air Museum and Captain Hooks Marina and Dive Center are two attractions nearby that you can check out.

Top Marathon Shores Hotel Reviews

Hampton Inn Marathon - Florida Keys

Hampton Inn Marathon - Florida Keys

10/10 Excellent
"The rooms were clean."
Mary 11-night trip
Posted less than an hour ago
Hampton Inn Marathon - Florida Keys

Frequently asked questions

What is Marathon Shores like?
Travellers to Marathon's Marathon Shores neighbourhood will be sure to enjoy a stay here. Make sure that you visit Captain Hooks Marina and Dive Center and Marathon Air Museum as part of your Marathon Shores travel plans.
How many hotels will I find in Marathon Shores?
If you're searching for places to stay in Marathon, Expedia has something to meet your needs with 196 Marathon Shores hotels and other accommodation options to choose from.
If I need to cancel my hotel reservation in Marathon Shores, will I receive a refund?
Yes! The majority of hotel room reservations are fully refundable if cancelled before the hotel's cancellation deadline, which is often 24 or 48 hours before your arrival date. If your reservation is non-refundable, it might still be possible to cancel it and get a refund within 24 hours of booking. Put your dates in and click on "Search", then filter by "fully refundable" to view top deals in Marathon Shores.
What can I see and do in this Marathon neighbourhood?
A few attractions you might want to check out while you're in Marathon Shores are Captain Hooks Marina and Dive Center and Marathon Air Museum. Sunset Park Beach and Coco Plum Beach are also worth a visit when you're out sightseeing in Marathon.