A marina with various boats docked, including a yellow and white boat named 'Golden Gate'.

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Check availability on Fisherman's Wharf Boutique Hotels

This weekend
9 Oct - 11 Oct
Next weekend
16 Oct - 18 Oct

Our top choices for Fisherman's Wharf boutique hotels

A hotel courtyard with outdoor seating, a fire pit, and a vintage camper parked nearby.

1. Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
4.0 star property
Fisherman's Wharf
8.6 out of 10, Excellent, (2,855 reviews)
"Close to the wharf and many places to shop and dine!!"
United States
Jon
The price is ฿5,347
฿7,680 total
includes taxes & fees
31 Oct - 1 Nov
Hotel Zephyr San Francisco
An outdoor cafe with brick walls, outdoor seating, and a tree in the foreground.

2. Argonaut Hotel

Argonaut Hotel
4.5 star property
Fisherman's Wharf
9.4 out of 10, Exceptional, (1,375 reviews)
"Great location - distinctly different hotel- well done!"
United States
Richard
The price is ฿7,847
฿10,703 total
includes taxes & fees
1 Nov - 2 Nov
Argonaut Hotel
A covered outdoor dining area with a wooden deck, a table set for two, and a view of the sea and mountains in the background.

3. Fairmont Heritage Place, Ghirardelli Square

Fairmont Heritage Place, Ghirardelli Square
5.0 star property
Fisherman's Wharf
9.4 out of 10, Exceptional, (415 reviews)
"Excellent location and rooms - great space for families. Very helpful and friendly staff."
United States
Janelle
The price is ฿30,144
฿35,419 total
includes taxes & fees
30 Oct - 31 Oct
Fairmont Heritage Place, Ghirardelli Square
A large public square with a prominent clock tower, a bridge in the background, and palm trees.

4. Harbor Court Hotel

Harbor Court Hotel
4.0 star property
Downtown San Francisco
9.2 out of 10, Wonderful, (1,008 reviews)
"Great stay, good location, kind staff"
Canada
Yoojin
The price is ฿6,703
฿9,514 total
includes taxes & fees
24 Oct - 25 Oct
Harbor Court Hotel
A courtyard with a stone pathway, outdoor seating, and potted plants.

5. Hotel Kabuki, part of JdV by Hyatt

Hotel Kabuki, part of JdV by Hyatt
4.0 star property
Western Addition
9.2 out of 10, Wonderful, (1,000 reviews)
"Loved our short stay"
Canada
frank
The price is ฿8,723
฿11,534 total
includes taxes & fees
25 Oct - 26 Oct
Hotel Kabuki, part of JdV by Hyatt
A modern hotel room with a grey sofa, a dining table, a TV, and a large window with curtains.

6. The Clift Royal Sonesta San Francisco

The Clift Royal Sonesta San Francisco
4.0 star property
Union Square
9.2 out of 10, Wonderful, (1,538 reviews)
"Great location, staff and amenities and of course the Redwood Room!"
United States
Randall Gray
The price is ฿7,376
฿9,995 total
includes taxes & fees
17 Oct - 18 Oct
The Clift Royal Sonesta San Francisco
A grand lobby with high ceilings, chandeliers, and a fireplace.

7. The Marker Union Square San Francisco

The Marker Union Square San Francisco
4.0 star property
Union Square
9.2 out of 10, Wonderful, (1,574 reviews)
"Wonderful stay!"
United States
Scott
The price is ฿5,427
฿6,387 total
includes taxes & fees
6 Nov - 7 Nov
The Marker Union Square San Francisco
A spacious lobby with a staircase, comfortable seating areas, and large windows offering views of the city.

8. The Clancy, Autograph Collection by Marriott

The Clancy, Autograph Collection by Marriott
4.0 star property
Downtown San Francisco
9.2 out of 10, Wonderful, (1,001 reviews)
"The staff was extremely welcoming and helpful. Beautiful hotel!"
Canada
Samantha
The price is ฿5,856
฿8,406 total
includes taxes & fees
16 Oct - 17 Oct
The Clancy, Autograph Collection by Marriott
A multi-story building with a fire escape, a ground-level entrance with a sign reading "Patio Hotel," and a storefront with a sign for "Liquor Deli."

9. Palihotel San Francisco

Palihotel San Francisco
4.0 star property
Union Square
8.4 out of 10, Very good, (761 reviews)
"Wonderful hotel! Would definitely stay here again. They even brought a bed for my cutie girl and a toy 🐾"
United States
Zureima
The price is ฿5,557
฿6,540 total
includes taxes & fees
18 Oct - 19 Oct
Palihotel San Francisco
A modern bar area with a long wooden counter, multiple bar stools, and a variety of bottles and glasses.

10. Hotel Emblem San Francisco

Hotel Emblem San Francisco
4.0 star property
Union Square
9.4 out of 10, Exceptional, (1,003 reviews)
"Cool hotel, great location and very clean"
United States
Keegan
The price is ฿4,580
฿6,739 total
includes taxes & fees
1 Nov - 2 Nov
Hotel Emblem San Francisco
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top Fisherman's Wharf Hotel Reviews

Handlery Union Square Hotel

Handlery Union Square Hotel

10/10 Excellent
"Clean, helpful staff, awesome location. I would ask if they could have coffee in lobby earlier than 9am"
Ruben 3-night trip
Posted 1 hour ago
Handlery Union Square Hotel

Frequently asked questions

What's the best boutique-style hotel in Fisherman's Wharf?
Hotel Zephyr San Francisco is a favourite hotel with Expedia travellers looking for a stylish stay, and features a 24-hour fitness centre and free WiFi. Argonaut Hotel and Fairmont Heritage Place, Ghirardelli Square are other choices for a boutique stay.
What's there to see and do in Fisherman's Wharf?
Visitors speak positively about this destination's beautiful ocean views, major shopping centres and top museums. Top activities and sights around Fisherman's Wharf include Pier 39, Oracle Park and Chase Center. You might also want to see spots like San Francisco Bay, Ghirardelli Square and San Francisco Carousel during your trip.
What's the best way to get to my boutique hotel in Fisherman's Wharf?
You have a few options for getting to Fisherman's Wharf. The nearest major airport is Oakland, CA (OAK-Oakland Intl.), which is located 13 mi (20.9 km) away. Walk to nearby metro stations such as Jones St and Beach St Stop, Jefferson St & Taylor St Stop and Hyde St & Beach St Stop.