A marina with various boats docked, including a yellow and white boat named 'Golden Gate'.

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Check availability on Fisherman's Wharf Boutique Hotels

Our top choices for Fisherman's Wharf boutique hotels

A hotel courtyard with outdoor seating, a fire pit, and a vintage camper parked nearby.

1. Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
4.0 star property
Fisherman's Wharf
8.6 out of 10, Excellent, (2,887 reviews)
"Great stay great location just awesome"
United States
Raul
The price is ฿3,484
฿5,490 total
includes taxes & fees
22 Nov - 23 Nov
Hotel Zephyr San Francisco
An outdoor cafe with brick walls, outdoor seating, and a tree in the foreground.

2. Argonaut Hotel

Argonaut Hotel
4.5 star property
Fisherman's Wharf
9.4 out of 10, Exceptional, (1,385 reviews)
"Love the location The hotel restaurant is amazing"
United States
Vickie
The price is ฿5,515
฿7,961 total
includes taxes & fees
22 Nov - 23 Nov
Argonaut Hotel
A fire feature with a modern design, surrounded by outdoor seating with cushions, and a view of the water and distant landscape.

3. Fairmont Heritage Place, Ghirardelli Square

Fairmont Heritage Place, Ghirardelli Square
5.0 star property
Fisherman's Wharf
9.4 out of 10, Exceptional, (416 reviews)
"Excellent location"
United States
Joy
The price is ฿27,502
฿32,315 total
includes taxes & fees
23 Nov - 24 Nov
Fairmont Heritage Place, Ghirardelli Square
A courtyard with a stone pathway, outdoor seating, and potted plants.

4. Hotel Kabuki, part of JdV by Hyatt

Hotel Kabuki, part of JdV by Hyatt
4.0 star property
Western Addition
9.2 out of 10, Wonderful, (1,002 reviews)
"Very nice and calming place to stay"
United States
Filiberto
The price is ฿6,277
฿8,686 total
includes taxes & fees
23 Nov - 24 Nov
Hotel Kabuki, part of JdV by Hyatt
A modern living room with a large window overlooking a bridge, a flat-screen TV, a clock, and a brown leather sofa.

5. Harbor Court Hotel

Harbor Court Hotel
4.0 star property
Downtown San Francisco
9.2 out of 10, Wonderful, (1,000 reviews)
"Was an amazing experience for fleet week"
United States
Emily
The price is ฿6,041
฿8,738 total
includes taxes & fees
21 Nov - 22 Nov
Harbor Court Hotel
A modern bar area with a long wooden counter, multiple bar stools, and a variety of bottles and glasses.

6. Hotel Emblem San Francisco

Hotel Emblem San Francisco
4.0 star property
Union Square
9.4 out of 10, Exceptional, (1,001 reviews)
"Very clean with an attentive staff."
United States
John
The price is ฿4,589
฿6,752 total
includes taxes & fees
20 Nov - 21 Nov
Hotel Emblem San Francisco
A spacious lobby with a staircase, comfortable seating areas, and large windows offering views of the city.

7. The Clancy, Autograph Collection by Marriott

The Clancy, Autograph Collection by Marriott
4.0 star property
Downtown San Francisco
9.2 out of 10, Wonderful, (1,001 reviews)
"Clean room, excellent staff, well located. Would stay at this hotel again."
United States
Rosario
The price is ฿5,618
฿8,129 total
includes taxes & fees
20 Nov - 21 Nov
The Clancy, Autograph Collection by Marriott
A spacious lobby with a reception desk, seating area, and a staircase leading to an upper level.

8. Hotel Triton Union Square San Francisco

Hotel Triton Union Square San Francisco
4.0 star property
Union Square
8.6 out of 10, Excellent, (1,007 reviews)
"Great location, helpful staff, and excellent service."
United States
Mandis
The price is ฿3,310
฿5,366 total
includes taxes & fees
25 Oct - 26 Oct
Hotel Triton Union Square San Francisco
A grand lobby with a marble staircase, a chandelier, and a teal sofa.

9. The Marker Union Square San Francisco

The Marker Union Square San Francisco
4.0 star property
Union Square
9.2 out of 10, Wonderful, (1,592 reviews)
"Great place to stay!"
Canada
Samantha
The price is ฿4,935
฿5,808 total
includes taxes & fees
22 Nov - 23 Nov
The Marker Union Square San Francisco
A modern hotel room with a grey sofa, a dining table, a TV, and a large window with curtains.

10. The Clift Royal Sonesta San Francisco

The Clift Royal Sonesta San Francisco
4.0 star property
Union Square
9.2 out of 10, Wonderful, (1,537 reviews)
"Great location, staff and amenities and of course the Redwood Room!"
United States
Randall Gray
The price is ฿6,044
฿8,429 total
includes taxes & fees
22 Nov - 23 Nov
The Clift Royal Sonesta San Francisco
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top Fisherman's Wharf Hotel Reviews

Hotel Zephyr San Francisco

Hotel Zephyr San Francisco

10/10 Excellent
"Sing better the scanning arm to get in and get out of the parking lot! People always get stuck trying to scan the card and they don’t know where to scan is just at the bottom of the screen but we have to take time looking for it! So just say scan your card at the bottom sing, thanks!"
Victor 1-night trip
Posted 3 hours ago
Hotel Zephyr San Francisco

Frequently asked questions

What's the best boutique-style hotel in Fisherman's Wharf?
Hotel Zephyr San Francisco is a favourite hotel with Expedia travellers looking for a stylish stay, and features a 24-hour fitness centre and free WiFi. Argonaut Hotel and Fairmont Heritage Place, Ghirardelli Square are other choices for a boutique stay.
What's there to see and do in Fisherman's Wharf?
Visitors speak positively about this destination's beautiful ocean views, major shopping centres and top museums. Top activities and sights around Fisherman's Wharf include Pier 39, Oracle Park and Chase Center. You might also want to see spots like San Francisco Bay, Ghirardelli Square and San Francisco Carousel during your trip.
What's the best way to get to my boutique hotel in Fisherman's Wharf?
You have a few options for getting to Fisherman's Wharf. The nearest major airport is Oakland, CA (OAK-Oakland Intl.), which is located 13 mi (20.9 km) away. Walk to nearby metro stations such as Jones St and Beach St Stop, Jefferson St & Taylor St Stop and Hyde St & Beach St Stop.